Shewanella benthica: SHEWBE_3548
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Entry
SHEWBE_3548 CDS
T06707
Name
(GenBank) putative exonuclease of the beta-lactamase fold involved in RNA processing
KO
K07576
metallo-beta-lactamase family protein
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99974 Translation
SHEWBE_3548
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Ortholog
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GFIT
Motif
Pfam:
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
SQH77511
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Position
SHEWBE:3422442..3424013
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AA seq
523 aa
AA seq
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MANFHNVDIVHHGAVDGVTGSCHQLNINARSAVLIDCGLFQGAETAGKANANTLEINFDI
ANLLALLVTHCHIDHVGRIPYLLAAGFNQPIYATSATAALLPIVIADALKVGVTKNKRLI
KLYLNKLQQLIIPIEYNLWFPLPVKSIASSSAAETYASFNAAKAKFKPAGHILGSAYVEI
ELSELNNNALSDKDRTHKITSMATNAKIDSRVNNQASSQVNSQIKSRADKHRVVFSGDLG
ATYTPLLAGPKSPYRADTLIIESTYGDKNHQSRQQRTHCLRQVIEKAVSDNGVVLIPAFS
IGRTQELLYELEQIIHQRSDHPLWAQMEIIVDSPLAAKFTEQYIQFKRLWDNEAKKKLNL
NRHPLDFEQLYTVDTHEEHLSTINYLANRNKPAIVIAASGMCSGGRIMNYLEKFLPKSTA
DVIFVGYQAKGTPGREIQTYGPRGGYVYINGDKIAIKAAIHTISGYSAHADQHNLINFVK
RMQHKPRHIRIVHGDDDAKHALATKYRQLLPEAEIVIGGARTG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattttcacaatgtggatattgttcatcacggcgctgttgatggagtcacgggc
tcttgtcatcaattaaatatcaatgcacggtccgccgtattaattgattgcggtctgttt
caaggcgccgaaactgccggtaaggccaatgcaaatacgttagagatcaactttgacatc
gctaacttactagctctgctcgtcactcattgccatatcgaccatgtcggccgtatcccc
tacctgcttgctgccgggtttaatcagcctatctatgccactagcgcaacggctgcgctg
ttacccatagtgatcgcagatgcgctaaaagtgggggtgaccaagaataaacgcctcatt
aagctttatcttaataaattacagcaactgattattcctatcgaatataacctttggttt
cccctgccagttaagtcaatagcatcgagttcagcagctgaaacctatgcaagcttcaat
gcggctaaagctaagtttaagcctgccggacatatcttaggttccgcttatgttgaaata
gaactcagtgagctaaacaataacgccctgagtgataaagatagaacccataaaataacc
agcatggcaactaatgctaaaattgatagccgagttaataatcaagccagtagccaagtt
aacagccagataaagagccgagcggataaacatagagtggtgttctctggtgatctgggt
gcgacttatacgcctttgcttgcgggccctaagagtccttaccgtgccgacacgctgatc
attgaatccacttatggtgacaaaaaccatcagagtcgtcagcaacgaacccattgctta
agacaagtgattgagaaagcggtatccgacaatggcgtggtgctcattccggcttttagt
atcggtcgtactcaggagctgctttatgaacttgagcagatcattcatcaaaggagcgac
catcctctctgggcacagatggagataattgttgattcgccgctggccgccaagtttacc
gaacaatatattcagtttaagcgcctgtgggacaacgaagcgaagaagaaactcaaccta
aatcgtcaccctcttgatttcgagcaattgtatacggtcgacactcatgaggagcatctc
agcaccataaactatctcgctaaccgcaataagcctgcgatagtcatcgccgcgagtggc
atgtgtagtggcggccggatcatgaactaccttgaaaagtttctgccgaaatctaccgca
gatgtgatttttgttggctatcaggctaaaggcacccctggtagagagatacaaacatac
ggccctagaggcggttatgtttatattaatggcgataaaatagctatcaaggcagcaata
cacaccatcagtggttattcggctcatgcagatcaacataacctcatcaatttcgtcaaa
cgtatgcagcataaacccagacacatacgtatcgtccatggtgatgacgacgccaaacat
gctttagccaccaagtatcggcaattgcttccagaagcagagatagtgataggaggagct
aggacggggtaa
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