Shewanella benthica: SHEWBE_3634
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Entry
SHEWBE_3634 CDS
T06707
Symbol
cydB
Name
(GenBank) cytochrome d terminal oxidase, subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
sbk
Shewanella benthica
Pathway
sbk00190
Oxidative phosphorylation
sbk01100
Metabolic pathways
sbk02020
Two-component system
Module
sbk_M00153
Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
SHEWBE_3634 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SHEWBE_3634 (cydB)
Enzymes [BR:
sbk01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
SHEWBE_3634 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
SQH77597
UniProt:
A0A330MCS1
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Position
SHEWBE:complement(3507299..3508438)
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AA seq
379 aa
AA seq
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MFDYEMLRFIWWALIGLLFVGFAVTDGFDMGVGALLPILGKDDTERRIMINTIAPHWDGN
QVWFISAGAALFAAWPMVYGVSFSGFYVAMMLVLFALYLRPVGFDYRSKIEDPRWRSAWD
WALFIGGFVPPLIIGVAFGNLLQGVPFNFDEYLRATYHGGFFGLLNPFGIIAGLICVSMF
MMQGATWLQMKTESDLRVRAAKAAQVLSLLLFVLFAAAGVWLVNGIDGYVITSALDTYGI
SDPTLKTVAVESGAWLANYDKYPLTMMFPVLGLVMPLLVIVASRLNRSGFAFLFSSVAIS
AVILTCGAAMFPFVMPSSLEPNVSLTMWDATASETSLTVMTWAAIIFIPIVLSYTIYTYY
KMFGRLSRSFIENNKTSLY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattatgaaatgttaagatttatctggtgggcgctgattggcttgctatttgtt
ggttttgccgtcaccgatggtttcgatatgggggtcggtgcactcttgcctattttaggt
aaagatgacaccgaacgtcgtattatgatcaataccatagctccccattgggacggcaac
caggtgtggtttatcagtgccggtgccgccttattcgcagcttggcccatggtatacggc
gtgtcgttttcgggcttctatgtggcgatgatgttggtgttgtttgccttatatctcagg
ccagtaggttttgattatcgctctaaaatagaagatccaagatggcggtcagcatgggat
tgggcattgtttatcggtggcttcgtaccgccgctgatcataggtgtcgccttcggtaat
ttgcttcaaggtgtgccgttcaatttcgatgaatacttgcgtgcgacttaccatggtggc
ttcttcggcttgttgaaccccttcggtatcatcgcgggtcttatctgcgtcagcatgttt
atgatgcaaggtgcgacctggttacagatgaagactgagagtgatcttagggttcgtgct
gcgaaggcagcacaagtgctgagtctgctgttatttgtcttatttgctgctgccggtgtc
tggctggtcaatggtatcgatggctatgtgatcacctcagctctcgacacttatggcata
tcggatccaacacttaagacggttgcagtagaatctggggcctggttggcaaactatgac
aagtatcctctgactatgatgttccctgttttgggactcgtcatgccactcttggtcata
gtagccagtcgcctgaatcgttctggtttcgccttcctgtttagttcagtggctatttca
gccgtgatcttgacctgtggtgcagccatgttcccattcgttatgccatcttcactggag
ccgaatgtgagtttgaccatgtgggatgccacggccagtgaaacatctctgactgtgatg
acctgggctgcgattatctttattccgatagtgctttcatacactatttatacctactat
aagatgtttggccgtctatctcgcagtttcatcgaaaacaataagacgtcactttactaa
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