Shewanella benthica: SHEWBE_3657
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Entry
SHEWBE_3657 CDS
T06707
Symbol
yfgB
Name
(GenBank) putative Fe-S containing enzyme
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbk03009
]
SHEWBE_3657 (yfgB)
Enzymes [BR:
sbk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
SHEWBE_3657 (yfgB)
Ribosome biogenesis [BR:
sbk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SHEWBE_3657 (yfgB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Radical_SAM_2
Motif
Other DBs
NCBI-ProteinID:
SQH77620
UniProt:
A0A330M9E6
LinkDB
All DBs
Position
SHEWBE:complement(3534308..3535429)
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AA seq
373 aa
AA seq
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MSAKKINLLDLDRKGLQALFTDMGEKPFRADQLMKWIYHFGVSDFEVMTNINKVLRAKLA
ARCEIKAPEISSYQKSADGTIKFAINVGDGQEVETVYIPEGDRATLCVSSQVGCALECTF
CSTAQQGFNRNLTVSEIIGQVWRVADFIGFIKKTGERPITNVVMMGMGEPLLNLKNVIPA
MDIMLDDFGFSLSKRRVTLSTSGVVPALDKLGDAIDVALAVSIHAANDELRDVLVPVNKK
YPLQEFLASIRRYIAKSNANRGRVTVEYVMLDHINDSTDQAHELAKLMKDTPCKINLIPF
NPYPGSPYGRSSNSRIDRFSKVLMEYGFTVIVRKTRGEDIDAACGQLAGDIRDRTKRLAK
KRMQENQISVTIN
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaaagaagatcaatttattggatctggatcgtaaaggactgcaagccttattc
accgatatgggtgaaaagccgttccgtgcggatcagctgatgaagtggatttatcatttt
ggcgtcagtgacttcgaagttatgactaatattaataaggtattacgggctaaacttgcc
gcgcgttgtgaaattaaagcgcctgaaatttccagttatcagaagtcagcagatggcacg
attaaatttgccattaatgtgggtgatggtcaggaagttgagaccgtgtacatccccgaa
ggcgatagagccacactttgtgtgtcttcccaggtaggctgtgcgctcgagtgcaccttc
tgctcgacggcccaacaaggtttcaaccgtaatctgactgtctccgaaatcatcggtcaa
gtgtggcgtgtcgccgattttatcggtttcatcaaaaaaactggcgaacgcccgatcact
aacgttgtcatgatgggcatgggcgaacccctgttgaatcttaaaaacgtgatcccggct
atggatatcatgttagatgatttcggcttcagcttgtcaaaacggcgcgtgaccctgtcg
acttcgggtgttgttccggccctggataagcttggtgatgccatcgatgtagccttagcc
gtgagtattcatgctgccaatgatgaattacgtgatgtcttagtcccggtgaacaagaag
tatcctctgcaggagttcttagccagcattcgtcgctatattgccaagtctaatgctaac
cgaggtcgtgtgactgttgaatatgtgatgttagatcacatcaatgacagcacagatcag
gctcatgagttggctaaactgatgaaagacaccccgtgtaagattaatttaattccattt
aatccttatccaggttctccctacggtcgctcttctaattcacgtatcgatcgcttctct
aaagtcttgatggaatatggcttcacagtcatagtgagaaagacccgaggagaagatatc
gatgcagcttgtggccagttagcaggcgatattagagacagaaccaagcgtttagcgaaa
aaacgcatgcaagagaatcaaatatcagtcacaataaactaa
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