Shewanella benthica: SHEWBE_3853
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Entry
SHEWBE_3853 CDS
T06707
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone 4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
sbk
Shewanella benthica
Pathway
sbk00740
Riboflavin metabolism
sbk00790
Folate biosynthesis
sbk01100
Metabolic pathways
sbk01110
Biosynthesis of secondary metabolites
sbk01240
Biosynthesis of cofactors
Module
sbk_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
SHEWBE_3853 (ribB)
00790 Folate biosynthesis
SHEWBE_3853 (ribB)
Enzymes [BR:
sbk01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
SHEWBE_3853 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
SHEWBE_3853 (ribB)
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GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
pAdhesive_17
Motif
Other DBs
NCBI-ProteinID:
SQH77816
UniProt:
A0A330M5P1
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Position
SHEWBE:complement(3710568..3711671)
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AA seq
367 aa
AA seq
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MSLYSIEEIIEDIRLGKMVILMDDEDRENEGDLIMAADMVTAQTINFMATFGRGLICQTL
TKSRCQQLNLPLMVVNNNAQFSTNFTMSIEAAEGVTTGISAQDRAVTVLAAVAKDAKASD
IVQPGHIFPLMAKEGGVLIRAGHTEAGCDLARLAGFEASSVIVEILNEDGTMARRPDLEV
FAEKHGLKMGTIADLIEYRNTKESNVVREAKCKLPTRFGEFDMLTFRDTIDNQLHYVLIK
GEVKEEVLVRVHLQNTFNDLLHSERDQKRSWPLEKAMQRIADEGGVLVLLGHQEHSSDIL
AKVKAFELEDNGLAPTPAKWQGTSRQVGVGSQILANIGVTKMRLLSSPKHYHSLSGFGLE
VTEYISE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcattatacagtatagaagagatcatcgaagatattcgtctcggtaaaatggttatc
ttgatggacgatgaagatcgtgagaatgaaggcgatttgatcatggcagcagacatggtc
acggcacaaacgattaactttatggcgaccttcggccgtggtttaatttgtcagactttg
actaaatcacgttgtcagcagctgaacttaccgctgatggtggtcaataataatgcccag
ttttcgactaacttcactatgtctatcgaggctgccgaaggagtgactaccggaatttct
gcccaagacagagcagtaactgtgttagccgcggtcgcaaaagacgctaaggccagtgac
atagtgcagcccggccatatcttccccttgatggcgaaagagggcggcgtgcttattcgt
gcgggtcataccgaggcgggttgtgatttagccaggctggcaggttttgaagcgtcatct
gtgattgtcgaaatattgaatgaagatggcaccatggctcgtcgtccggatcttgaggtg
ttcgccgagaaacacggtcttaagatgggcaccattgccgatcttatcgaatatcgcaat
accaaagagagcaacgtggtacgtgaggctaagtgtaaactgcctacacgcttcggcgag
ttcgatatgctgaccttcagagacactatcgataatcagctccactatgtattgattaag
ggtgaagttaaagaagaagtgctggtgcgtgttcatctgcaaaataccttcaatgacctg
ttgcactcggaacgtgatcagaagcgtagttggccccttgagaaggcgatgcaacgtatt
gccgatgaaggcggagtactggtacttctgggtcaccaggaacacagcagcgatatactt
gccaaagtaaaagcattcgagctcgaagacaatggcctagcacccacgccagccaagtgg
cagggaacttcacgtcaagtaggtgtcggctcgcagatattagccaatattggtgtgact
aagatgcgtctactgagctcacctaaacattatcattcactttcaggttttggcttagaa
gtgaccgagtacataagtgaatag
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