Shewanella benthica: SHEWBE_3872
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Entry
SHEWBE_3872 CDS
T06707
Symbol
rsuA
Name
(GenBank) Ribosomal small subunit pseudouridine synthase A
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbk03009
]
SHEWBE_3872 (rsuA)
Enzymes [BR:
sbk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
SHEWBE_3872 (rsuA)
Ribosome biogenesis [BR:
sbk03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SHEWBE_3872 (rsuA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Phage_TTP_11
DUF5818
NgoMIV_restric
Motif
Other DBs
NCBI-ProteinID:
SQH77835
UniProt:
A0A330M776
LinkDB
All DBs
Position
SHEWBE:complement(3733486..3734202)
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AA seq
238 aa
AA seq
DB search
MRLDKFLCKSTDFTRVESIDLIEARKVRVNGIVIVTPQAQVHENNSIMLAGQRLIARPSR
YIMLHKPMNTLCSNVDGDYPSVMNYLHMDRAEDLHITGRLDADTTGLLLLTDDGRWSFNI
INPKYHCEKTYRVTLRDPIEEGDIDELVSRFEQGLQLQGEKSLTLAAKLEVIASHQVLLT
LCEGRYHQVKRMFFTVGNRVVGLHRQQVGKLSLDIELGEWRYLTEDEVSGFNCYESVI
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcgataaattcctctgcaagagtacagatttcacccgtgtcgaatcaattgac
ttgattgaggccaggaaggtgcgggttaacgggattgttattgtcacgccccaggcgcaa
gtacatgaaaacaacagcatcatgttagctggtcagcgcctgattgccaggccttcgcgt
tatatcatgttgcataagccaatgaatacactttgttccaacgtcgatggcgactatcca
tcggtgatgaactatctccacatggacagagccgaggacctgcatatcacaggtagactc
gatgccgatactacaggcctcttgctgctcaccgatgatggacgttggtcgtttaacatc
attaaccctaagtatcactgtgagaaaacctatcgggtgactctgcgagatcctatcgaa
gagggggatatcgatgagttggtatccagattcgaacaggggctgcagctgcagggcgaa
aaatccctgacgctagccgctaaacttgaggttattgcgtcgcatcaggtactgctaact
ctttgtgagggacgctatcatcaggtaaaacgtatgttttttaccgtgggaaatcgtgtg
gtcggcttacatagacagcaggtagggaagctgagcttagacatagagcttggtgagtgg
cgatatctgacggaagatgaagtcagtgggtttaactgctatgagtcggttatttga
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