Shewanella benthica: SHEWBE_4103
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Entry
SHEWBE_4103 CDS
T06707
Name
(GenBank) TonB-dependent receptor C-terminal domain protein
KO
K02014
iron complex outermembrane recepter protein
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbk02000
]
SHEWBE_4103
Transporters [BR:
sbk02000
]
Other transporters
Pores ion channels [TC:
1
]
SHEWBE_4103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
SQH78063
UniProt:
A0A330M9C9
LinkDB
All DBs
Position
SHEWBE:complement(3950015..3952024)
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AA seq
669 aa
AA seq
DB search
MGTFSFNESNKLSKIAILVSSVLTLSVVSSHVMAAEVANTGASQVNSVDEVITVIGRSVN
TPLNIAANVNIIDSAQIEMSGATTLTQVLRGQSGIQISDSNSGAVFSMRGFSASQAANNT
LILVDGRRLNNIDIAAPSINAIPLNQIERVEILSGSAGVLYGDQAVGGVINIITKAPTGT
GGSIQLSGGSFNTYEGKADVSGAINDTWRYYAAASYNQGDNYRDHNANKTSSVLARLQYQ
TDSDNFFIETSYYDNDREMAGSLSEDQIKEDPTQANPSNSDDYQHEMTTAIRSGYQHQLN
DAWSLGADINYTDSKVNSISWGKPGTNKRSFLEFTPKAVANIATEKGDLSIVTGIDLSRG
ESEFDLAFTQRSNVQKVASAYVQASVPLTQSLSYVVGGRYSEAKDDLVDGSVYPEGIELD
QDAHAFELGLNYRPTATHRLYVRVDDNFRFAKVDEQAYTSPGVVGLNPQTGRSYEAGWDW
TPKSHTLRLSAYRLDLEDEIVFDSSAETPIGGGFPGANVNADASRRYGVSADWDWQLTDK
VQLGAEYNYIDAEFTAGVNEGKQLSWVAEHTGRGYFSIDANQNWQVFTEVVYTGERFIEG
DNGNVDPKLDAYWLTNLAINYTKDAWLASFRVDNLFDEEYVSSGYYSSWGNGYYVGTGRA
LRLTGSYRF
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgggtactttctcatttaatgagtcaaacaaactttcaaaaatagccattctagtcagc
agtgtacttactctgtcagttgtctcatcgcacgttatggcggctgaagtcgctaatact
ggtgcaagccaggtaaacagtgtcgatgaagtgatcactgtgattggccgcagcgtaaac
accccactgaatatcgcggcaaacgtgaacattatcgattcggctcagatagagatgagc
ggcgcgaccacgctaacccaagtgttacgtggccagagtggcattcaaatttcagattca
aactcgggcgcggttttttcgatgcgtggcttctctgccagccaagctgcgaacaataca
ctgatcttggtcgatggtcgccgtcttaataatatcgatattgccgcgcctagcatcaat
gcgatcccactcaatcaaatcgagcgtgtcgaaattttatccggtagtgccggtgtgctc
tatggagatcaggctgtcggtggtgtgattaacatcatcactaaggctccgacgggcaca
ggtggaagtattcagctgtctggcggcagtttcaacacttatgaaggcaaggccgatgtg
tctggtgcgattaacgatacctggcgctactatgcggcggcgagttataaccaaggtgat
aattaccgcgaccataatgctaacaagacatcatcagttttagctcgcctgcagtatcaa
acagattcagataactttttcatcgagaccagctattacgataacgatcgtgaaatggcg
ggatcattgagtgaagatcaaattaaggaagatccaacacaggctaacccgtctaactct
gatgattatcaacatgagatgaccacggctattcgcagtggttaccaacaccagttaaat
gatgcctggtctctgggcgccgatatcaattataccgacagtaaagttaacagtatcagc
tggggaaaaccaggcaccaacaagcgctcatttcttgaatttacgcctaaagccgttgcg
aatattgccacggaaaagggcgacttgagtattgtcaccggtatcgatttgagccgtggt
gagtctgagttcgatttagcttttacacaaagaagcaatgtgcagaaggtggctagtgcc
tatgttcaggcgagtgtaccgttaactcaaagcctaagttatgtggtgggtggtcgttac
tccgaagcgaaggatgatcttgttgatggctctgtgtatccagaaggaatagagctagat
caagatgcccatgccttcgagctaggcttgaattatcgtccaacagcgacacatagactt
tatgttcgcgttgatgataacttccgtttcgctaaagtcgatgagcaagcttatacctct
cctggcgtggtcggtcttaacccgcagacgggccgttcatatgaagccggttgggactgg
acacctaagtcacacacattacgtttgagtgcttatcgcttagatcttgaagatgagatt
gtatttgactcgagtgctgagacccctattggtggcggttttcctggtgccaacgtcaac
gccgatgcgtcacgtcgttacggtgtgagtgccgattgggactggcagctgaccgataag
gtacaactgggcgccgagtataactatatcgatgctgaatttaccgcaggcgtaaatgaa
ggtaagcaactctcttgggttgccgagcacactggccgcggctacttcagtatcgatgcc
aatcaaaattggcaggtgtttaccgaagttgtttataccggtgaacgtttcatcgaaggt
gataacggcaatgtggatcctaagctagatgcatactggttgactaacttggcgattaac
tacaccaaggatgcctggcttgccagcttccgtgtcgataacttgttcgatgaagagtat
gtcagctcaggttactacagcagctggggtaacggttactacgttggtactggccgagca
ctacgcctgaccggaagttataggttttaa
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