Shewanella benthica: SHEWBE_4169
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Entry
SHEWBE_4169 CDS
T06707
Name
(GenBank) conserved membrane protein of unknown function
KO
K07091
lipopolysaccharide export system permease protein
Organism
sbk
Shewanella benthica
Pathway
sbk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SHEWBE_4169
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbk02000
]
SHEWBE_4169
Transporters [BR:
sbk02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
SHEWBE_4169
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
SQH78129
UniProt:
A0A330M5Y1
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All DBs
Position
SHEWBE:complement(4003896..4005008)
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AA seq
370 aa
AA seq
DB search
MIVFRYLIREVFKAQIAVLAVLLAIFISQHFVRVLADASDGEFPASLVMTLLGLNLPYLA
VLVIPLSLFLGILMAHGRMYADSEMVILHGVGVSEWYITRVTLLLAVGNMIFTGILSVYV
TPWAEEKQNQVLEHAQSEAGLAAITQGRFQTSPNGRAVLFVERIGRNNELYKVFVAQLPD
PDDESGISNIVVAQGGKVIEDETGGQRLQLSDGVQYQATPKQVDFQIIEFGSYQMQIKEQ
AVDERRRKLSAMPINELMDIEGPAATAEFHWRLAIPLAIPLMTLIAVPMARVNVRQGKFA
KMFPAVLLYLGYFCLMIAGRKALEDGVIPEYLGMWWIHASALCMGILLLGKERPSGAKLS
GIFKRKRVKA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgattgtatttagatatttgattcgagaagttttcaaggcacaaatagccgttcttgca
gtacttttagctatttttataagccaacattttgttcgtgtactcgcagatgcatctgac
ggagaatttcctgcttcattagtcatgaccctattgggtcttaatttaccttatctggcc
gttttggtgataccgctgagtttatttctcggtatcttaatggctcatggccgaatgtat
gccgacagtgaaatggttattcttcacggcgtgggagtgagtgagtggtatatcactcga
gtgaccctgttgttggccgtaggtaatatgatttttaccggtattctgtcggtttatgtg
acaccttgggccgaagagaagcagaaccaggtactcgagcatgctcagtcagaagccggg
ctggcagccatcactcagggacgctttcaaaccagccccaatggcagagccgtgcttttt
gtcgaacgaattggccgaaataacgaactgtacaaggtgttcgtagcacaactaccagac
ccagatgatgaatctggtatcagtaatatcgtcgttgcccaaggcggtaaggtcatcgag
gatgaaaccggtggccagcgcttgcaactgagtgatggtgtgcaatatcaggcgacgcct
aaacaagtggattttcagatcatcgagttcggtagctaccagatgcagatcaaggagcaa
gcggtcgatgagcgccgccgtaagctttccgcgatgcctattaatgagttgatggatata
gagggacccgcggcaacggctgaatttcattggcgtctggccattcccttagcgattcct
ttaatgacccttattgctgtgcctatggccagggttaatgtgcgtcagggcaagttcgcc
aagatgttcccggcggtgctactttatctgggttatttctgtctgatgattgccgggcgt
aaagcgctggaagacggtgtgatacctgagtatctagggatgtggtggatacatgcatcc
gccttgtgcatggggatactgctcttaggcaaagagcgtccttccggtgctaaactaagc
ggaatatttaagcgcaagagagtcaaagcgtga
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