KEGG   Shewanella benthica: SHEWBE_4311
Entry
SHEWBE_4311       CDS       T06707                                 
Name
(GenBank) WD domain, G-beta repeat protein
Organism
sbk  Shewanella benthica
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WDR55 Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_NUP159_NUP214 Beta-prop_WDR3_2nd Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_ACSF4 Beta-prop_VPS8 WD40 ANAPC4_WD40 CFAP251_N Beta-prop_TEP1_2nd Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_NWD2_C DSE1_N Beta-prop_HPS5 Beta-prop_WDR41 ASA1 Beta-prop_Vps41 PEP5_VPS11_N UCP007778 Beta-prop_SPT8 B-prop_COPA_B_2nd
Other DBs
NCBI-ProteinID: SQH78271
LinkDB
Position
SHEWBE:4141181..4142230
AA seq 349 aa
MLVSVIVSLIRARLILPHNDSNKLASIIITVSLMAFGLTLTGCGKPVAKQQANSIHRYVA
DNLIDADLSSDAKIAVTLSHTRELSVWDNASKSLLHQWQVADFDEPTYLVSLSGNNQYLA
VTGKHRVSIFDLNSGRLEVSWLAQGFDSDASISSLYLNQNGKRVLLGMNEGSVISVDLEN
KQLSMFQLHDGPVSHVEFISYDEQILSAAHDGHALIWTSNNGQVIKDFSLPLRITSISFD
AANRRLFIADALDNHLIADSHSAESIGHLSFLARYRYFRQAIFVDRGKTLITASSKQKII
SWDISSGKKKKHWNITAFTAGTTVLDMAINPSGQLITLSSDGALESWDY
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgctagtatcggttatcgtttcattaattcgagccagattgatcttgccccataacgac
tcaaataagctcgcctctataattattaccgtttcgctgatggcattcggtcttactctc
actggctgtggtaaacctgtggccaaacagcaagcaaactcgattcatcgatatgtcgca
gacaatctcatcgatgccgacctgtccagcgatgccaagattgcagtcaccttgagccac
acccgtgagttatcggtatgggataacgcctcaaaatctctgttacatcaatggcaggta
gcagacttcgacgagcctacttacttggtgtcactctccggaaataatcagtacctggcg
gtgacgggaaagcatcgagtatcgatatttgatctcaacagcggtcgactcgaggtctcc
tggcttgcacaaggcttcgatagtgatgccagtatctccagcctgtatctgaatcaaaac
ggaaaacgagtgttactcggtatgaacgaaggttcggtgattagcgtcgatctcgaaaac
aagcaattgtctatgtttcaactccatgacgggccggtcagccatgttgaatttatctcc
tatgacgaacaaatattgtcggcagcccatgatggacatgcgctcatttggaccagtaac
aatgggcaagttatcaaggactttagcttgcccctgcgtatcaccagcatcagcttcgat
gcagccaatcgtaggctatttatcgccgatgccttagataatcacctaatagccgattca
cattctgctgagagtatcggccatttaagctttctggcacgctatcgctattttagacag
gcgatatttgtcgaccggggtaagacgctcatcacagcgagctcaaaacagaagatcatc
agctgggatataagctcaggcaagaaaaagaagcactggaacatcacagcttttaccgcc
gggaccacagtgctcgacatggccattaaccccagcggtcagctaattaccctaagctcg
gatggcgccttggagagctgggactattga

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