Shewanella benthica: SHEWBE_4504
Help
Entry
SHEWBE_4504 CDS
T06707
Symbol
frdA
Name
(GenBank) Fumarate reductase flavoprotein subunit
KO
K00233
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
7.1.1.12
]
Organism
sbk
Shewanella benthica
Pathway
sbk00020
Citrate cycle (TCA cycle)
sbk00190
Oxidative phosphorylation
sbk00620
Pyruvate metabolism
sbk00650
Butanoate metabolism
sbk00720
Other carbon fixation pathways
sbk01100
Metabolic pathways
sbk01110
Biosynthesis of secondary metabolites
sbk01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SHEWBE_4504 (frdA)
00620 Pyruvate metabolism
SHEWBE_4504 (frdA)
00650 Butanoate metabolism
SHEWBE_4504 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
SHEWBE_4504 (frdA)
00720 Other carbon fixation pathways
SHEWBE_4504 (frdA)
Enzymes [BR:
sbk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SHEWBE_4504 (frdA)
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.12 succinate dehydrogenase (electrogenic, proton-motive force generating)
SHEWBE_4504 (frdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
FAD_oxidored
NAD_binding_8
DAO
Motif
Other DBs
NCBI-ProteinID:
SQH78464
UniProt:
A0A330MAK0
LinkDB
All DBs
Position
SHEWBE:complement(4321120..4323132)
Genome browser
AA seq
670 aa
AA seq
DB search
MKLIYTDSLVVGAGLAGLRVAIASKERGLDTLVLSLIPAKRSHSAAAQGGMQASLGNTVK
GMGDDEDIHFQDTVKGSDWGCDQDVARMFAHCAPKAVRELANWGVPWTRVTEGPRQIVVN
AEKVTIEEAKQAHGLINARDFGGTKKWRTCYTADGTGHSLLYAVDNKAISMNIPVHERVE
ALAIIHDGKRCHGVVARCLVTGELRAYIGKSTTIATGGYGRIYEVSTNAIICEGIGQALA
LETGVAKLGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGHRFMPDYEPEKKELAS
RDVVSRRMTEHMRKGKGVDSPYGPHLWLDITLLGRKHIETNLREVKEICENFLGIDPTKE
WIPVRPTQHYSMGGIRTDKTGQNPQLKGLFSVGEAACWDMHGFNRLGGNSLAETVVGGMI
IGKYVADFCEENTLEIDTGLAESFIDKVRSEIDDLVAGEGTESPFVIRKEMQRIMMDYVG
IFRNGSELDKAVSELQGLLKRSRDIGLKCNKRHANPELVAALRVKRMIKVALTVACGAAA
RTESRGAHAREDFPQRNDKDWLNRTLSSWPDENALSPELSYEPLDVMKMELPPGYRGYGI
DNAIAHPDTEKREQEIANIISELGEDADRHQRQNAIMPFEVPEALQPKNERLSDKLTESG
EPAAVRKIAK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactgatatataccgattctttagtggttggagccggattggctggcttacgagtt
gccatcgcttccaaggagcgtggactcgatactctagtgctttctcttattccagccaag
cggtcacattccgctgcggcgcaagggggcatgcaagcgagtctgggcaataccgtgaaa
ggaatgggtgatgatgaagatattcattttcaggatacggtaaagggttccgactggggt
tgcgatcaggatgtcgcacgtatgtttgctcactgtgcccccaaggcggtaagagagctg
gcaaactggggcgtcccctggactcgggtgacagaaggtccacgacagatcgtggtgaat
gccgaaaaggtcaccatagaagaggctaaacaagcccatggtttgatcaacgcccgtgat
ttcggtggcactaagaagtggcgcacctgttataccgcagatggtactggacattccttg
ctttatgcggtcgataacaaggctatctctatgaatattcctgtccatgaacgcgtcgaa
gccttggcaatcattcatgatggtaagcgttgtcacggtgtggtagcgcgctgcctagta
accggagagctaagggcttatatcggcaagtcgaccacgattgctactggcggttatggc
aggatttatgaagtatcgaccaatgccattatttgcgaaggtatcggtcaggcgctcgcc
ctagaaactggcgttgccaagctgggcaatatggaagcggtgcagtttcatccgactgcc
atcgtgcctgtgggcattctgacgaccgaaggctgtcgcggtgacggtggcttgctaaga
gataaagacggccatagattcatgccggattacgagccggagaagaaagaactggcttcc
cgtgatgtggtttctcgtcgcatgacagagcatatgcgtaagggcaagggggttgatagt
ccctatggtccgcatttgtggctcgatattaccttgcttggtcgtaaacatattgaaact
aatttgcgtgaagtgaaagagatctgtgagaacttcctggggattgaccctactaaggag
tggatcccggttcgtcccactcaacattattctatgggggggatccgcaccgataaaacg
ggtcaaaatccgcaactgaaaggcttgtttagtgtcggtgaagctgcgtgctgggacatg
catggtttcaatcgactcggtggtaactcgctggcggaaaccgtggtcggtggcatgatt
atcggtaaatatgttgccgatttctgcgaagaaaataccttagagatagacacaggactt
gccgagtcatttatcgataaggtgcgcagcgaaattgacgatttagtggcgggtgaaggt
acagagagtccgtttgtgataagaaaagagatgcaaaggatcatgatggattatgtgggt
attttccgcaatggtagcgaactcgataaagcggtttctgagctgcaagggctactgaaa
cgctcgcgtgatattggccttaaatgtaacaagcgccatgcaaatcctgaattggtcgca
gcgctacgtgttaagcgcatgattaaagtcgcactcacagtggcatgcggcgcggccgca
cgtacagaaagccgtggtgcccacgctcgcgaagacttccctcaaagaaacgataaagac
tggttgaatagaacgctttcgagctggcctgatgagaatgccctctctccagagctgagt
tatgagccgctggatgtgatgaagatggagctgccgcctgggtatcgaggttacggtatc
gacaatgctatcgctcatcctgataccgagaagcgggagcaggagatcgccaatatcatc
agtgagcttggagaagatgccgaccgacatcagcggcaaaatgcaattatgcccttcgaa
gtccccgaggctctgcagcctaaaaatgaacgtttaagtgataagctgacagaaagcggt
gagcctgcggcagtgaggaaaatagccaaatga
DBGET
integrated database retrieval system
