Shewanella baltica OS155: Sbal_0535
Help
Entry
Sbal_0535 CDS
T00478
Name
(GenBank) SNF2-related protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
sbl
Shewanella baltica OS155
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbl03021
]
Sbal_0535
Transcription machinery [BR:
sbl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Sbal_0535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
ABN60064
UniProt:
A3D001
LinkDB
All DBs
Position
complement(597769..600675)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFALGQRWISDTESELGLGTVVQVEGRMVTVLFPATGENRMFSRAEAPLTRVIYNPGDS
VESHEGWSLAVSELTEKDGIVIYHGIHSETGEQVTLRETLLNHNIRFNKPQDRLFAGQID
RLDRFGVRYQCQMLRHKLASSDLLGLQGPRVGLIPHQMWIAHEVGRRYAPRVLLADEVGL
GKTIEAGLIIHQQLLTGRAERILIIVPDTLRHQWLVEMLRRFNLRFSVFDEDRCVEAYAD
HDNPFYTEQLVICSLELLRKKKRLDQALDADWDLLVVDEAHHLEWTEEAPSRAYQVVEAL
SEVIPGVLLLTATPDQLGHESHFARLRLLDPDRFYDYDAFLAEEDSYKDVAIAAEALAGN
TKLPDAAINSLTELLGEKDISPSIRLIQADGIDAEVQQAARSELLQELLDRHGTGRVLYR
NSRASVKGFPKRFFNAYPHAMPDQYQTAARVSGMMGGHKSLEAKAAQALSPEKLYQEFED
NSASWWKFDPRVDWLIEFLKSHRSKKVLIIASQAETALSLEEALRTREGIQATVFHEGMS
IIERDKAGAYFAQEEGGAQALICSEIGSEGRNFQFASHLVLFDLPLNPDLLEQRIGRLDR
IGQKNDIQIHLPYLEDTAQERLMQWYHQGLNAFELTCPSGHVLYSEFAEDLLNVLAVDDS
DELTNLLNHTQSRYKELKHAMEQGRDKLLEINSHGGEKAMAIVQRLAQNDGDTHLIGSVI
RLWDIIGVDQEDKGENSIILRPSEHMMFPTYPGLPEDGVTVTFDRDTALSRDDIALITQE
HPLVQTGLDLITGSETGTTSVAILKNKALPAGTLFLELIYMADASAPKSSQLYRYLPPTP
IRVLLDKNGNDLSAKVDYASFDKQLSAVNRHIGGKLVTASQPILHPLFAKGEEYAQVVVD
EMVAQAREKMTQQLSAERSRLESLKAVNPNIREEELEYLRNQMQELNTYLDASQLQLDAI
RMVLVSHV
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcgccttaggtcaacgttggataagtgataccgagtcagagcttggtttagga
actgtggttcaagtagaaggccgtatggtcactgttttattccctgccacgggtgagaat
cgcatgttctcccgagcagaagcccctctgacacgcgttatatacaatcccggcgattcg
gttgaaagccatgaaggctggagccttgcggtcagcgagttgaccgagaaagacgggata
gtgatctatcacggcattcacagtgagacaggcgagcaagttaccctgcgtgaaaccctg
ctgaaccacaatattcgtttcaataaaccccaagaccgtttattcgccggccaaatcgat
cgcctcgaccgttttggtgtgcgttatcagtgccaaatgttgcgccacaaactggcctca
tcggatttgcttggtctgcaaggtccacgcgttggacttattccgcatcaaatgtggatt
gcccatgaagtcggtcgtcgctatgcgccgcgggtactgctggccgatgaagtgggttta
ggtaaaaccattgaagcgggtctgattattcaccaacaactgctgaccggccgcgccgaa
cgcatcctgattatcgtgcccgatactttgcgccatcagtggttagtggaaatgctgcgc
cgctttaacctgcgcttctcggtatttgatgaagatcgttgtgtagaagcctatgccgat
cacgacaatcctttctatacagaacaattagtgatttgttcactcgaattactgcgtaag
aaaaaacgtctcgatcaagccctagatgccgattgggatctgttagtggttgacgaagca
caccacttagaatggaccgaagaagcgccaagccgcgcctatcaagtggttgaagcatta
agcgaagtgatcccaggtgttttgctattaaccgcaacgccggatcaacttggccatgaa
agtcacttcgcccgtttgcgcctgctcgatccggatcgtttctacgattacgatgccttc
ctagccgaagaagacagctataaagacgtcgccattgccgccgaagcgctggctggcaac
actaaattacccgacgccgccatcaacagcttgaccgaattactgggcgagaaagacatc
agcccaagtattcgtttaatccaagccgacggcattgatgccgaagtacagcaagctgct
cgcagcgaattactgcaagaattactcgaccgtcacggtactggccgcgtcttataccgc
aacagccgcgcctcagtaaaaggcttccctaagcgtttctttaacgcttacccacacgcc
atgccagatcaatatcaaacagccgcacgcgtcagcggcatgatgggcggacacaagtca
ttagaggcgaaagcggcgcaagccctgagccctgaaaagctgtatcaagaatttgaagat
aacagcgccagttggtggaagtttgatccccgtgtggattggttaattgagttcttaaaa
tcacaccgcagcaaaaaagtgctgatcatcgccagccaagcggaaaccgccctgagctta
gaagaagccctgcgcacccgcgaagggattcaagcgacggtattccacgaaggcatgtcg
attatcgagcgcgataaagccggcgcttactttgcccaagaggaaggcggcgcacaggca
ctgatctgttctgaaattggttctgaaggccgtaacttccagtttgccagtcacttagta
ctattcgatctgccgctaaacccagatctattggaacagcgcatcggtcgtttagaccgt
atcggccagaaaaatgatatccaaattcacttgccgtaccttgaagacaccgcccaagaa
cgtttgatgcagtggtatcaccaagggctaaatgccttcgaactgacttgtccgagtggc
catgtgctttacagtgaatttgccgaagatctgttaaacgtgcttgcggttgatgacagc
gacgagctgacaaacctgctcaatcacacccagagccgttataaagaactcaagcacgcc
atggagcaaggccgcgacaaactgctggaaatcaactcacacggcggcgagaaggcaatg
gctatcgtccaacgcctcgcccagaatgatggtgatacccatttgatcggttcagtgatc
cgtctgtgggatattatcggtgtcgatcaagaagataagggtgaaaactcaatcattctg
cgcccgagcgagcacatgatgttcccaacctaccctggcttgccagaagatggcgtgact
gtgaccttcgaccgtgacacagcgttatctcgcgatgatattgcgctgatcacccaagag
catccactggtgcaaacggggctagatctgatcacaggttcagaaactggcaccaccagc
gtcgcaattctaaaaaataaagccctgcctgcaggtaccttattcttagaactcatctac
atggccgatgcttctgcacctaagtcgagccagttgtaccgttatttaccgcctacaccc
attcgcgtgttgctggataaaaatggtaacgacctgtcggctaaagtggattacgccagt
ttcgataagcaattgagcgcggtgaatcgtcacattggcggcaagttagtcaccgcatct
cagccaattctgcatccgttatttgctaagggtgaagaatatgctcaagtggttgtcgat
gaaatggtcgcccaagccagagagaaaatgactcagcaactaagcgcagagcggagtcgt
ttagagtcacttaaggcggtaaaccccaatatccgagaggaagaattggaatacctgcgc
aatcagatgcaagagttaaacacttatctggatgccagccagttacaactcgatgcgatc
cgtatggtgctcgtcagccacgtatag
DBGET
integrated database retrieval system
