Shewanella baltica OS155: Sbal_0840
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Entry
Sbal_0840 CDS
T00478
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
sbl
Shewanella baltica OS155
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbl03009
]
Sbal_0840
Enzymes [BR:
sbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Sbal_0840
Ribosome biogenesis [BR:
sbl03009
]
Prokaryotic type
rRNA helicases
Sbal_0840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_11
AASDHPPT_N
Cas3-like_C_2
7TM_GPCR_Sra
Motif
Other DBs
NCBI-ProteinID:
ABN60365
UniProt:
A3D0V2
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All DBs
Position
complement(948804..950063)
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AA seq
419 aa
AA seq
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MQFEDFQLDPSLLESLNAMGHHSPTTIQQETIPYALEQRDILARAPTGTGKTASFLLPSL
QHLIDFPRRFAGQARILILTPTRELASQIHRYACHLATGQGLDIAIVTGGVPYGPQEEAL
AGKVDILVATPGRLMEYLDKGNFNAQEVDILIIDEADRMLDMGFSSVVQAIAIEAQGRKQ
NMLFSATLEGGGVQRFAREVLNDPIEIDVEAPRSEKAKIHQWIHLADDKEHKFALLCHLL
RQEDVKRTIVFVKTRDIVSSLEGQLLKVGIACAFMRGDMEQKKRFQALSRFTKGEVNVLL
ATDVAARGIDIDDITHVINFDMPRSADTYIHRIGRTGRAGAKGTAISLAEAHDMRIVGKI
ERYIEQPLKRRVIEELRPKNKEARTPGKKKAKVKAKEAAKKTSKKEAAKKASKIARKKK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttgaagatttccagcttgaccctagcttattagagtcgcttaatgccatgggg
catcattcacccaccactattcagcaagaaactatcccttatgccctagagcaaagagat
attctcgcgcgcgccccgacaggaacaggtaaaacagcgagctttttactgccatcgctg
caacatttaatcgacttcccccgccgtttcgctgggcaagcacgtatcctgatcctcacg
cctacccgtgagttagccagccaaatccaccgttatgcgtgtcacttagccacaggccaa
ggtttagacatagcgatcgtgactggtggtgtgccttacggaccacaagaagaagcctta
gcgggcaaagtcgatattctggtcgcgacccctggccgcctgatggaatatttagacaaa
ggcaatttcaacgcccaagaagtcgatatcttaattatcgacgaagccgaccgcatgcta
gacatgggcttctcttctgtggtgcaagcgattgctatcgaagcccaaggccgcaaacag
aacatgttgttctctgccaccttagaaggcggcggtgtgcaacgttttgcccgtgaagtg
ttaaacgacccgattgaaatcgatgttgaagcacctcgcagcgaaaaagccaagatccac
caatggatccacttagccgatgataaagagcataaatttgccctgttatgtcatctgctg
cgccaagaagatgtgaaacggactatcgtgttcgtaaaaacccgcgacatcgtttctagc
ttagaaggccagttacttaaagtcggtattgcctgcgccttcatgcgtggcgatatggaa
cagaaaaaacgtttccaagctttgagccgctttaccaaaggtgaagtgaacgtcttgctg
gcaaccgatgtggctgcacgcggtatcgatatcgacgatatcacccatgtgatcaacttc
gacatgccacgctctgccgatacctacattcaccgtatcggtcgtactggccgcgctggc
gcaaaaggtactgcgatttcgttggccgaagcccacgacatgcgtatcgtcggtaaaatt
gagcgttatatcgagcaaccgttgaaacgccgcgtgatcgaagagctgcgtccaaagaac
aaagaagcgcggacaccgggtaagaaaaaagccaaagtgaaagcgaaagaagcagcgaag
aaaaccagcaagaaagaagcggcaaagaaagcgagtaaaatcgcccgcaagaagaagtaa
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