Shewanella baltica OS155: Sbal_0845
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Entry
Sbal_0845 CDS
T00478
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sbl
Shewanella baltica OS155
Pathway
sbl03410
Base excision repair
sbl03430
Mismatch repair
sbl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sbal_0845
03430 Mismatch repair
Sbal_0845
03440 Homologous recombination
Sbal_0845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbl03400
]
Sbal_0845
DNA repair and recombination proteins [BR:
sbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Sbal_0845
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sbal_0845
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Sbal_0845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Kbp-5
Motif
Other DBs
NCBI-ProteinID:
ABN60370
UniProt:
A3D0V7
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All DBs
Position
954926..956659
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AA seq
577 aa
AA seq
DB search
MSPLIHKIVRRPTVDDSHLPAHLSPLLKQLYARRGALTHECELVLKGLLRPETMKGLPEA
AALIADAMQANKSILIVGDFDADGATSTSVCMLALRMMGAVKVDYLIPNRFDYGYGLSPE
IVAVAASKQAEMLITVDNGISSIDGVAAAKAFGMQVVITDHHLPGHELPAADAIVNPNQP
DCPFASKSIAGVGVAFYLMTALRAELRTRNWYQTRGIAEPNLGTLLDIVALGTVADVVSL
DANNRILVEAGLQRVRAGRCRVGITALLEVAKRNPARIVASDFGFAVGPRLNAAGRLDEM
ALGVETLLCEDMMYARRMAAELDGLNQERRELEVGMQQEALKSLEHLKLNEDELPWGIAL
FQEDWHQGVIGILASRIKDKYHRPVIAFADAGNGQIKGSARSIKGLHMRDLLELVNTRHP
GLIIKFGGHAMAAGLSLKAGSFATFAKAYDDAVRELLKPELLTGELWSDGELTPTELNLE
MAQLLRNAGPWGQAFEEPLFDGYFTIVQQRLVGERHLKLVLETQCGTVMLDAIAFNVDLH
TWPDATIHHARIVYKLDVNEYRGNFTLQLMVEQIEAM
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcccttgatccataagatagtccgtcgcccaaccgttgatgatagccatttaccc
gctcatctttcgccgctattgaagcagctttacgctcgccgcggtgcgctcacccacgaa
tgcgaacttgtcctcaagggtctattaagacctgaaaccatgaaaggcctgcccgaagct
gcggcgcttattgccgatgccatgcaggcgaataagtcgattttgatcgtcggtgatttt
gatgccgatggcgcgacctcaaccagcgtatgtatgctggcgctacggatgatgggcgca
gttaaagtggattatttgatccccaatcgcttcgattacggctacggcttaagccctgaa
attgttgcggttgcggcgtctaaacaggctgaaatgctgatcactgtcgataacggtatt
tcatcgattgatggcgttgctgcggccaaagcctttggtatgcaagtggtgattactgac
catcatttacccggacacgagttgcctgctgctgatgcgatagtgaatccgaatcaaccc
gattgcccctttgcgagtaaatcgattgccggtgtcggtgtcgccttttatttgatgacg
gcattaagggctgaactgcgaacgcgaaactggtatcaaacgcgcggtattgctgagcct
aatctagggacgctgctcgacattgttgccctaggtaccgttgccgatgtggtatcactc
gatgccaataatcgcattttagtcgaagcgggtttgcagcgcgtgcgagcgggccgctgc
cgtgtgggcattaccgcgctgcttgaagtcgcgaaacgcaaccccgcgcgtattgttgca
tctgattttggttttgccgtgggcccaaggcttaatgccgcaggccggctggatgaaatg
gcgcttggggtcgaaaccttactctgtgaagacatgatgtacgcgcggcgtatggcggcc
gagctcgatgggttaaaccaagagcgtcgtgagctggaagtcggcatgcagcaggaagcc
ttaaaaagccttgagcacttaaagctcaacgaagacgagttaccttggggtatcgcgcta
tttcaagaagattggcaccaaggcgtcattggtattttggcctcgcgcattaaagacaaa
taccacagacccgtgatcgcctttgccgatgcgggcaatggtcaaattaaaggctcggcg
cgttcaatcaaaggcttgcatatgcgcgacttgctggagctggtcaacacgcgccaccca
ggattgattatcaagtttggtggccatgcgatggcggcgggcttatcactcaaagccggt
agttttgcgacatttgccaaagcctatgatgatgcggtgcgtgaactgctcaaacctgaa
ctgctaactggcgagctgtggtccgatggtgaactcactcccactgaactgaatcttgag
atggcccagttactgcgcaatgctgggccttggggacaagcctttgaagagccactgttt
gatggctattttacgatagtgcagcaacgcctcgtcggcgagcgccatcttaagcttgta
ctcgaaacccagtgcggcactgtgatgctcgatgcgattgcttttaatgtggatttacac
acttggcccgatgcgaccattcaccatgctcgtatcgtttataagcttgatgtgaatgag
tatcgaggtaatttcaccttgcaactcatggttgagcagattgaagccatgtag
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