Shewanella baltica OS155: Sbal_0871
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Entry
Sbal_0871 CDS
T00478
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sbl
Shewanella baltica OS155
Pathway
sbl00630
Glyoxylate and dicarboxylate metabolism
sbl00680
Methane metabolism
sbl01100
Metabolic pathways
sbl01120
Microbial metabolism in diverse environments
sbl01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Sbal_0871
09102 Energy metabolism
00680 Methane metabolism
Sbal_0871
Enzymes [BR:
sbl01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Sbal_0871
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Pyr_redox_3
NAD_binding_8
Fer2_4
Fer4_7
DAO
Fer4
HI0933_like
Fer4_6
Fer4_8
Thi4
FAD_oxidored
NAD_binding_7
FAD_binding_3
GIDA
Amino_oxidase
FAD_binding_2
Fer4_2
Fer4_9
AlaDh_PNT_C
Fer4_18
Fer4_10
Fer4_16
Fer4_22
Fer4_21
Fer4_Nqo3
Lys_Orn_oxgnase
Shikimate_DH
Fer4_17
Fer4_15
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
ABN60396
UniProt:
A3D0Y3
LinkDB
All DBs
Position
complement(984061..988338)
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AA seq
1425 aa
AA seq
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MIELRIDDQVLSVNPTDNLLQVAHAAGIAIPSLCDPSAASQQLGTHAHSHADADKQACNL
CVIQIENADASLRCVRACETPVAAGMRVITQSEWLSQQRKQALTAILSDHFADCEAPCQQ
ACPAGVDVQSYLYHIAQGNHTEAVKVIKQTLPLPLSIGRVCPAFCEAQCRRGLVDEPIAI
RQLKRHAADLDLADGEKGGTSYVPPRQADTGKKVAIIGAGPAGLSAGYYLSNQGHSVEIF
EAMPQAGGWLRYGIPEYRLPKAILDKEIALLCHNGLTIHTETRLGHEVHLNQLVEDFDAV
CLAIGAQKAVPMDYPGSTLKGCYLGVDYLKDHCLDQTLVLGKKVAVIGGGNTAIDCARTA
VREGCDVTLIYRRTRAEMPAEAYEVHEAEVEGVKFHFLTNPIENHSDAQGRVHAVTFAKM
ALGEADASGRRAPVDTGETFTQDFDTVIAAVSQTPDLSFMQDPASPLSQGTLALSRWNTF
IGCEHTMSSGVEKLFVVGDARRGPATAVAAIGDGHKAAIAIDKLLKKGLSCDLHANAFNS
AKAISKAVTQDLPATDFYPAVPRKARLTMPELSAVQRLLNYGEVELGFAPDAAMQEAARC
LECACQANTDCKLRDYATDYHVEPKSLNTQSARKFSVDKSSPFIQFDANRCISCGKCVDV
CQLQSGHCAIQFAHDSYQALPQDLSETIERRAPRVGFSASMADSKCVQCGNCVQVCPTGA
LVDARDKRQGDETPLKTASTICTYCGVGCRLDLKIDASTNQIRHIEGNKESVVNQGMLCV
KGRFGFDVIHSEKRLTTPLIRKNGQLTPSSWPEAIAYVAEHLQQIKQQHGSNALASLASA
KATNEENFLLQKFVRSILGTNNIDHCARLCHSSTVTGLQQSIGSGAMTNDIPSIQASDVI
FIIGSDTSSAHPIIASKIKQAVALHGARLMVADPKRVAIADSAQLYVAHRPGTDVMLLNA
IMAEIIRNDWQDKSYIAARTEGVDALYAELAKADYSLENAALITGVKAEDIASIARTIGT
ADKTAIYYAMGITQHTTGHDNVTAISNLQLLCGNIGVEGAGINPLRGQSNVQGACDMGAL
PNFFSGYQKVTDIHARMRFEAHWKTPLSAEIGVTATHMMHDISKGKIKALYVMGENPVLS
DPDQAHVLRALNAIDFLVVQDIFLTETAELADVVLPAAAFVEKRGHFTNTERRVQRLEQA
LLPPGEALPDWQIVQAIANAMGAAWDYPNEEAIWQEINELTPQYRGITWQRLSTGEDGKI
PQGIQWPCPDETHPGTPIMHQGQFTRGLGKFTPVSYRLPAEMPCSEYPLTLSTGRLLEQF
HTGTLTRKTAGLDLLGSPKVMISVYDAEQLGIGNGDKIKLTTRRGEIEIDAFVTKRAQAG
VLFLPFHFVEAAANKLTINALDPVAFIPEYKVCSVRVERVVEKID
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacttcgaattgatgaccaagtgttgtcggttaatccgaccgataacctactg
caagtggcgcatgctgctggcatagcaatacccagcttatgtgatcccagcgcagcctcg
cagcaattaggcactcatgcacactctcatgcagacgcagataagcaagcctgcaatttg
tgtgtcatccaaattgaaaatgccgacgccagtttgcgctgcgtacgcgcctgcgaaacg
ccggtcgcagcgggcatgcgggtgataactcagtccgaatggttaagtcaacagcgcaaa
caagcactgacagcgatcttgagcgatcacttcgccgattgtgaagccccctgccaacag
gcatgccctgcgggcgtcgatgtgcagagttacctgtatcacatcgcccaaggcaaccat
actgaagccgttaaagtcattaaacaaaccttgccgctaccactgtctattggccgagtt
tgccccgctttttgtgaggcacaatgtcgccgcggactggtcgatgagcccatcgccatt
cgtcaactcaaacgccacgccgccgatctcgatctcgccgatggcgaaaagggcggcacg
agttatgtgccgccacgccaagccgacacgggcaaaaaagtcgcgattattggggcgggc
ccagcaggattaagtgcaggatattacttatcaaaccaaggccatagcgttgagatattc
gaagctatgccacaggctggtggctggctgcgctatggcattcctgaatatcgtttacct
aaggcgatactcgataaagaaatcgcactcttgtgccataacggcttaaccatacacaca
gaaacgcgcctcggccatgaggtgcatttaaatcaattagttgaagatttcgatgccgtt
tgtctcgccattggcgcccaaaaagccgtgcctatggattacccaggcagcacgctcaaa
ggttgctacttaggtgtcgattacttaaaagatcattgcctcgaccagacacttgtactg
ggcaaaaaagtcgccgtcattggtggcggtaataccgctatcgattgcgcccgcactgcg
gtgcgtgaaggctgcgatgtcaccttaatttaccgccgcacccgcgcagaaatgcccgcc
gaagcttacgaagtacacgaggccgaagtcgaaggggtgaaatttcattttttaactaac
ccaattgaaaaccatagcgatgcgcaaggcagagtacacgccgtcacctttgctaagatg
gcactcggcgaagccgatgcctctggcagacgcgctcccgttgataccggtgaaaccttt
acccaagattttgatactgtaatagccgcagtatcacaaactcccgacctgagttttatg
caagatcccgccagtcctttaagccaaggcacacttgcccttagccgctggaataccttt
attggctgcgagcacactatgtcatccggggttgaaaagctctttgtggtgggggatgcg
cgccgcggccctgccaccgcagttgccgccatcggtgatggccataaagccgccatcgcc
atagataaattactcaaaaaaggcctaagttgcgatctgcatgccaatgcatttaattcc
gctaaagccatcagcaaagcggtaacacaagacttgcccgcaaccgatttttatcccgcc
gtaccgcgtaaagcccgtttaaccatgcccgagctgagtgcggtgcagcgtttactcaat
tacggcgaagtcgagctaggctttgcccccgatgccgcgatgcaagaagcggcgcgatgc
cttgaatgcgcctgccaagccaatacggattgtaagttaagggactatgcgaccgactac
catgtcgagcctaagtcactcaacactcaaagcgcgcgtaagttttcggtcgataaatcg
agtcctttcattcaatttgatgcgaatcgctgtattagctgcggtaagtgcgttgatgtg
tgccagctacaaagtggccattgtgcgattcaatttgcccatgattcctatcaagcactg
ccgcaagacctaagcgaaaccatcgaacgccgcgcaccgagagtcggctttagcgccagc
atggccgacagcaaatgtgtgcaatgcggcaactgtgtacaagtttgtccaacgggtgca
ctcgtcgatgcgcgggataaacgccaaggcgatgaaacgccactcaaaaccgcctcaacg
atttgtacctattgcggcgtaggctgtcggctcgaccttaaaatcgatgccagcactaat
cagatccgtcatatcgaaggcaacaaagagtctgtggttaaccaaggcatgttatgtgtg
aaaggccggtttggcttcgatgttattcacagtgaaaaacgcctcacaacgccactaatt
cgtaaaaatggccagctcacgccaagtagttggcctgaagccatcgcctatgtggccgaa
catttacagcaaataaaacagcaacatggcagtaatgcactagcaagcttggcctcggca
aaagccaccaatgaagaaaacttcctgctgcaaaaatttgtcagaagcatactcggcacc
aacaacatcgaccactgcgcccgtctgtgtcattcatctacggtaacaggcctgcagcaa
agtattggtagtggcgctatgaccaatgacattccgagcattcaagcatcggatgtgatt
tttatcataggctcagacaccagcagcgcccacccgatcatcgcctcgaaaatcaaacaa
gccgtggctttgcatggcgcgagactaatggtggcagatcctaaacgtgtcgccattgcc
gacagtgcacagctttatgtcgcccacagacccggcactgacgtcatgttactcaatgcg
attatggcggaaatcatccgcaacgactggcaagataaaagctacattgccgcacgcacc
gaaggcgtggatgctctctatgctgaactcgcaaaagcagattacagcctagaaaacgcg
gccttgataaccggcgttaaagccgaagatatcgccagcattgcccgcaccataggcacg
gccgataaaaccgcaatctactatgccatggggatcactcagcacacgacgggacacgac
aatgtcacagccatatccaatctacaacttctgtgcggcaatattggggttgagggtgcg
gggattaacccactgcgtggacagagtaatgtgcaaggtgcctgcgacatgggcgcacta
cccaacttcttcagtggctaccaaaaagtcactgacattcatgccagaatgcgtttcgag
gcacattggaaaacgccgttatcggcggagattggcgtaacagcaacccacatgatgcat
gatatttccaaagggaaaattaaagctttgtatgtaatgggcgaaaaccccgtattgagc
gatcctgaccaagcccatgtgcttagggcccttaacgctatcgactttttagtggtgcag
gatatcttcctcaccgaaaccgccgagcttgccgatgtggttctgcccgccgccgcgttt
gtcgaaaaacgcggtcatttcaccaatacagaacggcgagtgcagcgactcgaacaggcc
ctgttaccgccaggcgaagccctgcccgattggcaaattgtccaagccattgccaatgcg
atgggcgccgcttgggattaccccaatgaagaagcgatttggcaggaaatcaatgagcta
acaccacaataccgcggcattacttggcagcgattaagcactggagaagacggtaaaatt
ccccaaggcattcaatggccttgtccagatgaaacccatcctggaacgcccatcatgcac
caaggccaatttacccgcggcttaggcaagttcacgccagtgagttatcgcttacccgcg
gaaatgccctgcagtgagtacccgctcaccctctcaaccggacgtttactggaacagttc
cacacaggcaccttaacccgtaaaacggccggcttagacttactcggctcgcctaaagta
atgatttcagtctatgacgctgagcaactcggcataggcaatggcgataaaatcaaactc
actacccgtcgcggcgaaattgaaatcgacgcctttgtgacgaaaagagcgcaagctggc
gtgctattcctgcccttccattttgttgaggctgctgcgaataaactcaccattaatgcg
ctcgaccctgtggcctttatcccagaatataaggtctgctctgtgagggtggaacgggtt
gtcgagaagattgattaa
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