Shewanella baltica OS155: Sbal_0988
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Entry
Sbal_0988 CDS
T00478
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
sbl
Shewanella baltica OS155
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbl03009
]
Sbal_0988
03016 Transfer RNA biogenesis [BR:
sbl03016
]
Sbal_0988
Enzymes [BR:
sbl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
Sbal_0988
5.4.99.29 23S rRNA pseudouridine746 synthase
Sbal_0988
Ribosome biogenesis [BR:
sbl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sbal_0988
Transfer RNA biogenesis [BR:
sbl03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
Sbal_0988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
ABN60512
UniProt:
A3D199
LinkDB
All DBs
Position
complement(1133625..1135349)
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AA seq
574 aa
AA seq
DB search
MQLQPSCFTSFTQAIDAYALPQRFTFPFYYEPHPLCVIAANELQQHLETQSDWQHNFGLT
GELTGAIGKMFGVLLVQNTQGEVGYLSAFSGKLAEQNHWPRFVPPVFDMLAKDNFFHAEN
LQINQINEQLLTVENHPDIPRLSTELETEQAQAQAELAAHRQVMIDGRQSRKAQRNQLAA
QLAANPTDETLRENAITEAKLSQESINEKNQLRDIKRYWDERIHVISQALSPLTDGRDAL
RQQRKRLSAALQQKLFEQYRFLNIKGTEKSLNGIFNGTVELTPPAGSGECAAPKLLHYAF
KHGLKPLAIAEFWWGAPPKSEIRQHKQFYPACLRKCQPILGHMLEGLVVDDNPLLTNPAE
GKTLSILYQDDAMAIVNKPAEFLSVPGKEIEDSVYSRMRQTFPHATGPLIVHRLDMSTSG
LMVIALTKDAHKQLQKQFIQRTVTKRYVALLAGMPAVMANTQATGNISLPLRGDLDDRPR
QLVCHEFGKTAETHWELSQLDEMARTARVYLYPKTGRTHQLRVHCAHSEGLNTPIVGDDL
YGTRANRLHLHADLLMLQHPVTRERMRFQVDPDF
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttcagccttcttgctttacctctttcacacaagccattgatgcctatgccctg
ccgcagcgttttacatttcctttctattacgaaccacatccgctgtgcgtgattgcagcc
aacgaattacaacaacaccttgagactcaaagtgattggcaacataactttggcctaacg
ggtgagttaactggcgccattggcaagatgttcggggtactactggtgcaaaatacacag
ggtgaagtgggctatttgtcggcattttcgggcaagttagccgagcaaaaccattggcca
cgctttgttccacctgtgtttgatatgctggctaaggacaattttttccacgccgaaaac
ctgcaaatcaatcaaattaacgaacagctacttacagtagaaaaccatcccgacattccg
aggctatcaaccgagctagaaactgaacaagctcaagcgcaagccgaacttgccgcccac
agacaagtgatgatcgatggccgccaatcgcgcaaggcgcagcgtaatcaactcgcagcc
caattggctgccaatccgactgatgagaccttgcgtgaaaacgcaataactgaagcaaag
ctcagtcaagaaagcatcaatgaaaagaatcagttaagagatattaaacgctattgggat
gaacgtattcatgtcatcagccaagcgctaagcccactgacagatgggcgtgacgcgtta
cgacaacagcgcaaacggctctcggcggcgctgcagcaaaagctgtttgagcagtatcgt
tttttgaatattaaaggcacagaaaagagccttaacggcatatttaacggtacggttgag
ttaacgccacccgcaggctcgggcgaatgtgccgcgcctaagttgttacattacgccttt
aaacatggtcttaagccattagctattgccgagttttggtggggcgcgccgccaaaatca
gaaatccgccagcataagcagttttatcctgcctgtctgcgaaaatgccaacccatcttg
gggcatatgctcgaagggctcgtggtcgatgacaaccctctgcttaccaaccccgccgaa
ggcaaaacgctatctatcctctaccaggacgatgcgatggcgattgtaaataaacccgcc
gagtttttatccgtgcccggcaaagaaattgaagactcagtgtattcgcgcatgcgccaa
accttcccccatgccacaggtccgctaatcgtccacaggctcgatatgtcaacctcggga
ttaatggtgatcgcgctgacaaaagatgcccataaacagctgcaaaaacagtttatccag
cgcactgtgactaaacgttatgtggcacttttggcgggaatgcctgcggtcatggcaaat
acgcaggcgacgggtaacatctctttacccttgcgtggcgatttagacgatagaccgaga
caactcgtttgccacgagtttggtaaaactgccgaaacccattgggaattgagccaactt
gatgaaatggcacgtacagcccgcgtgtatctgtatcctaaaacaggcagaacccatcaa
ctcagggttcactgcgcccactcagaggggctaaataccccgattgtcggtgacgacctc
tacggcactcgtgccaatcgactgcatctgcatgcggatttattgatgcttcagcatccc
gttacccgtgaacggatgcgctttcaggtcgatccagatttttga
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