Shewanella baltica OS155: Sbal_1695
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Entry
Sbal_1695 CDS
T00478
Name
(GenBank) Exodeoxyribonuclease I subunit C
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
sbl
Shewanella baltica OS155
Pathway
sbl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Sbal_1695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbl03400
]
Sbal_1695
Enzymes [BR:
sbl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Sbal_1695
DNA repair and recombination proteins [BR:
sbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Sbal_1695
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sbal_1695
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sbal_1695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABN61206
UniProt:
A3D393
LinkDB
All DBs
Position
complement(1975062..1976480)
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AA seq
472 aa
AA seq
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MKMKDDKAGSIFWHDYETFGANPAKDRPSQFAGIRTDLDLNIIGEPETFYCKQAPDYLPS
PEAILITGITPQLANLKGIPETEFMGRIQALFSQPNTCVAGYNSLRFDDEVTRYGFYRNF
IDPYAREWQNGNSRWDIIDLVRACYAFRPEGINWPTKEDGSPSFKLEHLTQANGLSHEKA
HDAMSDVYATIAMAKLIREKQPKLYQYYFDLRRKQAVSDQIDVLNMQPLVHVSSKISARN
GCTTLISPVAHHPTNKNAVICVNLAMDLTPLFELDIEQIKTRMYTPRADLAEDELPIAVK
QIHLNKCPFITSAKILSDEHAARLGIDKEFAREQYKRLKLHPELREKLALLFEHDDSRAT
TDPDLMLYSGGFFSQADKAKMEIIRHTLPQNLAALDLQFDDPRIPEMLFRYRARNYPELL
DYEESQRWREFCQSRLADQDYVLKLENLLQDTQVDETKQKLLAALCHYLREL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaagacgataaagctgggtcgattttttggcacgactacgaaacctttggg
gctaacccggcgaaagacagaccctcgcaatttgccggtattcgaacggatttagatctc
aatattatcggcgagcctgagacattttattgcaagcaagcccctgattatttgccgtca
ccagaagcgatattgatcacagggatcactccgcagttagccaatttaaaaggcatccct
gaaactgagtttatggggcgtattcaagcactgtttagccagccaaacacctgtgtcgcg
ggctacaactcactgcgttttgatgatgaagtgacccgttatggcttttatagaaacttt
atcgatccctatgcccgtgaatggcaaaatggcaactctcgttgggatatcattgattta
gtacgcgcgtgttacgcatttagacccgaagggatcaattggccaaccaaggaagatgga
tctcctagttttaagctagaacatttgacccaagcgaatggtttaagccatgagaaagcc
catgatgccatgtctgatgtgtatgcaaccatcgctatggcaaaactcattcgcgagaaa
caacctaagttatatcagtactattttgacctgcgccgtaagcaagcggtgagcgatcaa
atcgatgtgctcaatatgcagccgttagtacacgtgagctctaagatcagtgctcgcaat
ggctgtacgacgttgatttcccccgtggcgcaccatccaaccaataaaaatgcagttatt
tgcgttaatttagccatggatttaacgccactctttgagctagatatcgagcaaattaaa
acgcgtatgtatacgccaagagccgatcttgccgaagacgaattaccgatcgcggtaaaa
caaattcatttaaataagtgcccttttatcacttcggctaaaatcctcagcgatgaacat
gccgctcgtttaggcatagataaagaatttgccagagagcaatataaacgccttaaactt
cacccagaactacgtgaaaaactggcgctattatttgagcacgatgacagcagagcgacc
acagatcccgatttgatgctctattcaggtggtttctttagccaagctgataaagcgaaa
atggaaatcatccgtcataccctaccgcaaaatttagcggcgctagacttgcagtttgat
gatccacgtatccctgaaatgctgtttcgttaccgcgcccgtaattaccctgaactactc
gattacgaagagtcgcagcgctggcgtgaattctgtcaaagtcgcttagccgatcaagac
tacgtacttaaattagaaaatctgctgcaagatacgcaagtggatgagactaagcagaag
ttactggctgccctttgtcattatttgcgtgaactttaa
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