Shewanella baltica OS155: Sbal_1865
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Entry
Sbal_1865 CDS
T00478
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sbl
Shewanella baltica OS155
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbl03016
]
Sbal_1865
Enzymes [BR:
sbl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Sbal_1865
Transfer RNA biogenesis [BR:
sbl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Sbal_1865
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
TFA2_Winged_2
Motif
Other DBs
NCBI-ProteinID:
ABN61371
UniProt:
A3D3Q8
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All DBs
Position
2165176..2166285
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AA seq
369 aa
AA seq
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MSAFQYVSDEASLNALVAQYKQSKILVLDTEFVRTRTYYAKLGLIQAYDGKTLALIDPVA
LPDLAQFWALLSDPNIVKLVHSCSEDLEVFAHYGKCQPTPLFDSQIAASLCGMGHGVGYA
KLVETCLGEVIDKGESRTDWIRRPLTEAQLSYAANDVLYLYQLYPQLEAKLSAQGRLAWL
YEEGERMTLGRLADPDLDTAYLKVKNAFQLTEIQLAYLKVLAKWRLEKALVRDLALGFVV
KDHGLIALAKKQPKSSADLFKLNDLTEQEKRIHGKDLLRVLQTADLVNLPELVDVLALKS
GYKSAFKAIKSCLVELCEQHDVPQEMLGSKRHIHEFLQWRWDKQQGDLPAVLCGWRGEIA
AESLAKLEV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagcgtttcaatatgtgagtgatgaagcaagccttaatgccctcgttgcccaatat
aaacagagtaagatactcgtgttagataccgagtttgttcgtactcgtacttattatgcc
aagttaggtttgatccaagcctatgatggtaaaaccttagctttgattgatccggtggct
ttacctgatttagcccagttttgggcgctgttatcggacccgaatatcgttaagcttgtg
cattcctgtagtgaagacttagaagtctttgcccactacggtaaatgtcagcctacgcct
ttatttgatagccaaattgccgcctctttgtgcggtatgggccatggtgtgggttatgcc
aagttagttgaaacttgcttgggtgaagtgatcgataaaggcgagtcgcgtacagattgg
atccgtcgtcctttaacggaagcccagttaagctacgccgctaatgacgtcttgtacttg
tatcagctctatcctcaactggaagcgaaactcagcgcccaaggccgtttagcttggtta
tacgaggaaggggaaaggatgaccctgggcaggcttgcagatcctgatctcgacacggct
tatttgaaagtgaaaaatgctttccaactgaccgaaatccaattggcttaccttaaagtg
cttgctaagtggcgtcttgaaaaagccttagtgcgtgatttagccctaggttttgtggtc
aaagatcatggtcttatcgcattagcgaagaagcaacctaaatcctcggctgacttgttt
aagctcaatgatttgactgagcaagaaaaacgtatccacggcaaagatctattacgtgtg
ttgcaaaccgctgatttggtcaatttacccgagttagtggatgtgctggcgttgaagtcg
ggttataaatcggcctttaaggcgattaaaagctgcttagtcgagttgtgtgaacagcat
gatgtgccgcaggaaatgctcggttctaaacgccatatccatgagtttttgcaatggcgt
tgggataagcaacaaggggatttgcccgcggtgttatgcggatggcggggcgagattgcc
gctgagtccctagctaagcttgaggtctaa
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