Shewanella baltica OS155: Sbal_2800
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Entry
Sbal_2800 CDS
T00478
Name
(GenBank) Transcriptional regulator Ada / DNA-3-methyladenine glycosylase II / DNA-O6-methylguanine--protein-cysteine S-methyltransferase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sbl
Shewanella baltica OS155
Pathway
sbl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sbal_2800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbl03000
]
Sbal_2800
03400 DNA repair and recombination proteins [BR:
sbl03400
]
Sbal_2800
Enzymes [BR:
sbl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Sbal_2800
Transcription factors [BR:
sbl03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Sbal_2800
DNA repair and recombination proteins [BR:
sbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sbal_2800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
HHH
DUF6233
Motif
Other DBs
NCBI-ProteinID:
ABN62287
UniProt:
A3D6C4
LinkDB
All DBs
Position
complement(3288189..3289886)
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AA seq
565 aa
AA seq
DB search
MSTDRASESAIKRDEIDSVHSLESSAGLLSASICREARMSRDPRFDGKFFVGVLTTGIYC
RTVCPAVAPKEQNVRYFDSAVKAAQAGLRPCLRCRPDSAPGSNPWKGTGTTLARAISLIE
AGALAGKSSGEPASTVTQLADRLGISSRYLNKLFTEGFGTSPKQYALYRQLLFAKQLLHQ
TQLPITQVALAAGFNSIRRFNEAFKQTLQLTPTQLRKTALTKASKEHVVGRTTGLGEIDT
MGEFVPHYGLTLYQYYRPPLDWASQLAFYRLRAVTGMEWFTPQMSHPQASDAVQVADEAN
LAAEANADDNGLEYGRCFAIGKMRGTVQIIHEPKLNRFKLAIALTEDSAVDELQLLVTEV
RRILDLDADMQQIEQGLSTLPSLGLMPFSGLRIPGAGSLFEAVCRAILGQQVTVVQATKL
LNILVEAYGECFSLNGREYRLFPTPEAIREASLTELKMPGARKLALNALAAFICEHPEAS
VDDWLSVKGIGPWTIAYAKLRGLGDPNVFLHLDLIVKKHLLALYIKNNRLDETAAAAVIY
SQLCEQLSQQIAPWGSYLTFQLWHQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagatagagcgtctgagagtgcgattaagcgtgatgaaatagactcagtgcat
tcactggagtcaagtgctgggctactttctgcgtccatttgccgtgaggctaggatgagc
cgcgatccgcgttttgatggtaagttttttgtgggggtattaacgacgggcatttattgc
cgtaccgtgtgtcccgccgtcgcgccaaaagagcagaatgtgcgttattttgattcggcc
gtgaaagccgcacaggcgggattgcgcccgtgtttgcgttgtcggcccgacagtgcgcca
ggttcaaatccgtggaaaggcactggcacaacgttggcgagggccattagtttaattgaa
gcgggtgccttagcggggaaatcatcgggagagccagcgtcgactgtgacacaattggct
gacagattagggatcagtagtcgttatcttaataagctctttaccgaaggttttggcact
tcgcctaaacaatatgccttatacaggcagttactgtttgcaaaacaactgctacatcaa
acccaattacctatcacccaagtcgcgctggcggcgggtttcaatagtattcgccgtttc
aatgaggcatttaagcaaactttacaattgacgccaactcaattaagaaagaccgcttta
accaaggcgtcaaaggagcatgttgttggacgaacaacaggattaggtgaaattgatact
atgggtgaatttgtgccgcactatggattaaccctatatcaatactatcgacccccatta
gattgggcatcgcagctggcattttatcgcttacgtgcggtgacggggatggagtggttc
acgccgcaaatgagtcatccacaagcgagtgatgctgttcaggttgcagatgaagcgaac
cttgccgctgaagccaatgctgacgataacgggctcgaatatggtcgctgttttgccata
ggcaagatgcgcggcacagtgcaaattatccatgagcctaagctgaatcgcttcaaactt
gcgattgctttgaccgaagattccgccgtcgatgagctgcaattgctagtcactgaggtg
cgacgtattttagatctcgatgcggatatgcagcagattgagcaaggtttaagtacgctg
ccgagtttaggtttaatgccgttttcgggattgcgcattcctggcgcaggatctttgttt
gaagcggtttgccgcgcgatcttgggtcagcaagtgacggtcgtgcaggcgactaagcta
ctgaatatattggttgaagcctatggcgagtgttttagtctcaatggccgcgagtatcga
ttattcccaacacccgaggcgattcgtgaggcgagtttaactgagctaaaaatgccgggc
gcccgtaaattagcgctcaatgcgctcgcggcgtttatctgcgaacatcctgaggcaagt
gtcgatgattggctcagcgttaaaggcataggtccttggacgatagcgtatgccaagctt
cgtggcttgggcgatccaaacgtgtttttgcatttggatttgattgttaaaaagcattta
ttggccttatatatcaagaacaataggttggatgaaacggccgctgcggcagtgatctat
tcccaattgtgcgagcagctgagtcaacaaattgccccgtggggcagttacttaaccttt
cagctctggcatcaataa
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