Shewanella baltica OS155: Sbal_3054
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Entry
Sbal_3054 CDS
T00478
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sbl
Shewanella baltica OS155
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbl03400
]
Sbal_3054
Enzymes [BR:
sbl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Sbal_3054
DNA repair and recombination proteins [BR:
sbl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Sbal_3054
Prokaryotic type
Sbal_3054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABN62536
UniProt:
A3D723
LinkDB
All DBs
Position
complement(3575430..3576947)
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AA seq
505 aa
AA seq
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MTSVNDSMAIDSMPIDSMSIKVQGNNALMWFRQDLRLADNQALTAACDWARANGVALKAI
YIATPTQWQRHDVAPIQLDFIERHINLLAQGLASLGITFELIQLDAFADVPAFIGHYCQQ
QGISRVFAGSEPEINEQQRDQACIQAGIPLVLTDEHCLLKPGTVLNLSGDMYKVFTPFSR
KWREIAARHAIFLLPVPAPLGPVLTEPKPHLFNNVTKVSSELWAAGEGQAKRILSAFIQQ
KVQDYKQDRDFPAIDGTSSISPYLAIGVISPRQCVAALLHDFPEVIVDDTSPARTWLNEL
TWREFYRHLLVAFPDLSKNHNFNRQADHVQWRNNPQEFAAWCEGRTGYPIVDAAMRQLNQ
TGWMHNRLRMVVASFLTKHLLIDWRWGERYFRQKLIDGDLAANNGGWQWSAGCGCDAQPY
FRIFNPMSQSEKFDPDGSFIRKYLPELASWGIKQLHQPSTAQTPSLFEQPLFNIKTAYPS
AIVEHSAARARALTVLGVLKKAAAQ
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagttaacgattcaatggcaatagattcaatgccaatagattcaatgtcaata
aaagtgcagggcaataatgcattgatgtggtttcgccaagatttacgccttgccgataat
caggcattaaccgctgcttgcgattgggcgcgggcgaatggcgtggcacttaaggcgatt
tatatcgctacgccaacccaatggcaacgccatgatgtggcgcccattcagttggatttt
atcgaacgtcacatcaatctgcttgcccaagggctggcgagtttgggtattacattcgaa
ttaattcagttagatgcctttgccgatgtgccagcgtttatcggtcattattgtcagcag
cagggtattagccgcgtgtttgccggtagtgagcctgagattaacgagcaacagcgtgac
caagcctgtattcaggcgggtattcctctggtgctaaccgatgagcattgtttgcttaag
ccgggcacagtgctgaatttgtccggcgacatgtataaggtgttcaccccttttagccgt
aagtggcgagaaattgccgcccgtcatgccatttttctgcttccagttccggcgccgctt
ggacctgtgttgaccgagccaaagccgcatttgtttaacaatgtcactaaagtatcgagt
gaactttgggctgcgggagaagggcaggcaaagcgtatactttcagcatttattcagcag
aaagtgcaggattataagcaagatagggatttccccgccatcgatggcaccagttcaatt
tcaccttatctggccattggcgtcattagcccaagacaatgcgttgccgcgttgctgcat
gacttccccgaggtgattgtcgacgatactagtccagcccgtacttggttaaatgagctt
acctggcgtgagttttatcgtcatttgctggtggcatttcctgatttatctaagaatcat
aatttcaatcgacaagccgaccatgtgcagtggcgaaacaatccgcaggagtttgctgct
tggtgtgaaggtcgtactggctatccgattgtcgatgcggctatgcgccaactcaatcaa
acgggttggatgcacaaccgtttgcgtatggtggtggcgagtttcctgactaaacatcta
ctgattgattggcgttggggcgagcgttatttccgccaaaagctcatcgatggtgacttg
gctgcaaataatggcggctggcagtggtccgccggttgtggctgcgatgcccagccttat
ttccgcatttttaatcctatgagccagagtgaaaagtttgatccagatggcagcttcatc
cgtaagtacttaccagagctcgcatcttggggaattaagcaattacatcaacccagtaca
gcgcagacaccgtccttgtttgaacagccgttatttaacattaaaacggcttatccgagt
gcgattgtcgagcatagtgcagcaagagcaagggcgttaaccgtactaggcgtattgaaa
aaggccgcggcccaataa
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