Shewanella baltica OS155: Sbal_3755
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Entry
Sbal_3755 CDS
T00478
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
sbl
Shewanella baltica OS155
Pathway
sbl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sbal_3755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbl03400
]
Sbal_3755
DNA repair and recombination proteins [BR:
sbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sbal_3755
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sbal_3755
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_21
AAA_25
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
nSTAND3
NACHT
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ABN63229
UniProt:
A3D916
LinkDB
All DBs
Position
4406808..4409690
Genome browser
AA seq
960 aa
AA seq
DB search
MDKIEIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLMFARVGEPRC
PTHNQPLAAQTVSQMVDKVLEMPQDSRLMLLAPVVNARKGEHVKLLEGLSAQGYIRARID
GEVCDLTDPPTLDLHVKHTIEVVVDRFKVRDDIKQRLAESFETALELSGGIATVATMDDD
TGTGKAKGEELIFSANFACPHCGYSMAELEPRIFSFNNPAGACQTCDGLGVQQFFDPERV
ISNTELSLAGGAIRGWDRRNFYYFQMLSSLAEHYKFDVEVPYEQLSEKVRKIVLYGSGKD
SIAFKYINDRGDVVVRNHPFEGILNNMDRRYRETESNSVRDELAKFINTQACQSCGGSRL
REEARNVFLGDINLPQLTTWSIGEALDYFEKVEFSGQKAQIAEKILKEIRDRLGFLVNVG
LNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLIHL
RDLGNTVIVVEHDEDAIRMADHVIDIGPGAGVHGGEVICDGPIEKIIACEESVTGQYISG
KRCIHIDTPRIPFDKTQVIELFGARGNNLRNVDLTIPIGLFTCVTGVSGSGKSTLINDTF
FKIAHRMLNGATVDEPSPYDRIEGMELCDKVVDIDQSPIGRTPRSNPATYTGIFTPIREI
FAGTQESRTRGYQVGRFSFNVKGGRCEACQGDGLIKVEMHFLPDVYVPCDSCKGKRYNRE
TLEVRYKGKNIHEVLQMTVEDARTFFDAVPAIARKLQTLMDVGLSYVRLGQSATTLSGGE
AQRVKLAKELSKRDTGQTLYILDEPTTGLHFADIQLLLDVLHRLKSHGNTIVVIEHNLDV
IKTADWIIDLGPEGGGGGGMILATGTPEDVAEHPTSHTARFLKPLLKRDIEMAKANKAKA
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggataagattgaaatacgcggcgcacgcacccacaatctcaagaatatcaacctgact
atcccaagggataaactgattgtcatcacgggcttatcgggatctggcaaatcctccctt
gctttcgatactttatatgccgagggccagcgacgttacgtcgagtccctgtcagcctat
gctcgccaatttttgagtttgatggaaaagcccgatgtggaccatattgaaggcttaagc
ccagcgatatccatagagcaaaaatccacttcccataacccgcgttccaccgtgggcacg
attaccgaaatttacgattacctgcgcttgatgtttgcccgcgtgggtgagccgcgttgt
ccgacacacaatcaacctttggcggcgcaaaccgtcagccagatggtcgataaagtgtta
gaaatgccccaagacagccgcttaatgctgctcgcgcctgtggtcaacgcccgtaagggt
gaacacgttaaattgctcgaaggtctatcggcgcagggttatatccgtgcgcgtattgac
ggtgaagtgtgtgacttaaccgatccgccaaccttagatttacacgttaagcacacgatt
gaagtggtcgtcgaccgctttaaagtgcgtgacgatatcaagcaacgcttagcggaatcc
tttgaaaccgcactggaactctccggcggcatcgcgaccgtcgccaccatggatgacgac
acgggtactggtaaagcaaaaggcgaagaactgattttctcggctaacttcgcctgtccg
cactgcggttattcgatggcagaattagagccaaggatcttctcctttaacaatccagcc
ggcgcgtgccaaacctgtgatggtttaggggtacaacaatttttcgatcctgagcgcgtg
atcagcaacactgagctgtcactggctggcggcgcgattcgcggctgggatagacgcaac
ttctactatttccaaatgctcagctcactcgccgaacactataagttcgacgtcgaagtg
ccctatgagcagctcagcgaaaaagtccgcaaaatcgtcctgtacggttcaggcaaagat
agcattgcctttaagtacatcaacgatcgcggcgatgtggtggtgcgtaatcaccccttc
gaaggcattctcaacaacatggacaggcgctatcgcgaaaccgaaagcaactcggtacgt
gacgaattagccaagtttatcaatacccaagcctgccaaagctgtggtggttcgcgtctg
cgcgaagaagcccgtaacgtgtttttaggcgatatcaatctgccgcaactcaccacttgg
tcgattggcgaagccttagattacttcgaaaaagtcgagtttagtggccaaaaagcgcag
atcgccgagaagattttaaaagaaatccgcgatcgcttaggtttcctcgtgaacgtgggc
ctcaattatttgagcctatcacgctcggcggaaaccctctcgggcggtgaagcccaacgg
attcgactcgccagccaaattggtgccggacttgtcggtgtgatgtatgtgctcgacgaa
ccttcaattggcctgcatcaaagggataacgaacgtctgctgcaaaccctgatccacctg
cgggatttgggcaacacagtaattgtggttgagcacgatgaagatgcgatccgcatggcg
gatcacgtgatcgacataggccctggcgctggtgttcatggcggcgaagtgatttgcgac
ggcccgattgagaaaatcatcgcctgtgaagagtcagttaccggacaatatatttccggt
aagcgctgcattcatatcgatacgccgcgtattccgttcgacaaaactcaagtaattgag
ttgtttggcgcgcgcggcaacaacctgcgcaatgtggacttaaccataccgattggcctc
ttcacttgtgtaacgggcgtatcgggttcaggtaaatcaaccttaatcaacgataccttc
ttcaagatcgcccatagaatgctcaacggtgcgactgtggatgagccatcaccctatgat
cgtatcgaagggatggagctgtgcgacaaagtggtcgatattgaccaaagcccgattggc
cgcacgccgcgctctaatcctgccacttatactggcatcttcaccccaattcgcgagatt
tttgccggaacccaagagtcacgaactcgcggttatcaagtcggccgcttctcctttaac
gttaaaggtggccgctgtgaggcttgccaaggcgacggcttgatcaaggtcgaaatgcac
ttcctacccgatgtgtatgtaccttgtgattcctgtaaaggtaagcgctacaaccgcgaa
accttagaagtacgctataaaggcaagaatattcacgaagtactgcagatgacagtggaa
gatgcgcgcactttcttcgatgccgtacctgccattgcccgtaagctgcaaaccttgatg
gatgtgggtttgtcctatgtgcgcctcggccaaagtgcgaccacactgtcgggcggcgaa
gcccaaagggtgaaacttgccaaagagctgtctaagcgtgacacgggccaaaccttgtat
atcttggatgaaccgaccacgggcttacactttgccgatatccaattgctgctcgatgta
ttgcatcgtcttaaatcccacggcaacaccattgtggtgattgagcataatctggacgtg
atcaaaacggcggactggattatcgatttaggtccagaaggcggtggtggtggcggtatg
attttagccacaggcacaccggaagacgtcgccgagcatccaacctcccacacggcacgc
ttcttaaagccactgctaaaacgggatattgaaatggcgaaggccaataaagccaaggca
taa
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