| Entry |
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| Name |
(GenBank) DEAD/DEAH box helicase domain protein
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| KO |
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| Organism |
sbl Shewanella baltica OS155
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:sbl00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sbal_3757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:sbl03019]
Sbal_3757
03009 Ribosome biogenesis [BR:sbl03009]
Sbal_3757
Enzymes [BR:sbl01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Sbal_3757
Messenger RNA biogenesis [BR:sbl03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Sbal_3757
Ribosome biogenesis [BR:sbl03009]
Prokaryotic type
rRNA helicases
Sbal_3757
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4411497..4413419
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| AA seq |
640 aa
MSSDERTFRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAF
ALPLLNKVTSQTTPQILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNA
LKRGPQVIVGTPGRVMDHMRRGTLKLDSLQALVLDEADEMLKMGFIDDIEWILEHTPSER
QLALFSATMPEQIKRVANQHLRNPVHVRIESSQTTVESIEQRFVQVSQHNKLEALVRVLE
VENTEGVIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVDQLKRGKLDILIA
TDVAARGLDVERIGHVVNYDIPYDAEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTIE
RSTNSRISPMKIPSPETVAERRLSRLGEQLAETINGDLDFMKEAVAQLCQQLEVDTDLLA
AALLQQVQQERPLQLPAIQERVRDERSERTERSDRGSDRNDRGGERGERRSREPRPMPAS
LGSAEALKDNPDLKMCRYVIDVGRENGVGVGNIVGAIANEANIDSRYIGAIQLYDAVTTV
DLPDGMPKDVLQHLRKVRVCGKPLNIREAGDQVFVDSGRSARSDRPAGDRKPRGDRPTGD
RPAGDRKPRAASTGDKPFADRKPRADKPAGERKPRKPRED |
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| NT seq |
1923 nt +upstreamnt +downstreamnt
atgtcatccgatgaaagaactttccgtgaactcggcctatccgagaatttgttgcgtgct
cttgacgagctaggttatgaaaaaccaacgccaatccaatcagccagtatcgatccactt
atggctggcaaagatattttaggtcaagcgcaaacaggtacaggtaaaactggcgccttc
gcgttaccactattaaacaaagttaccagccaaactacaccgcaaattttagtattagca
ccaacacgtgaattagccgtgcaggttgccgaagcgttcagtagctatgccaaatttatg
aagaatttccacgttcttcctatttacggcggccaaagcatgcaacaacagttgaatgcc
ctgaaacgcggcccacaagttatcgttggtacgccaggtcgtgttatggaccatatgcgt
cgcggcaccttgaaactcgactcattacaagctttagtgctagatgaagccgatgaaatg
ttaaaaatgggcttcatcgatgatatcgaatggatccttgagcacacgccaagcgaacgc
caactggcgttattctctgccactatgccagagcaaattaagcgtgttgctaaccagcac
ttacgtaatcctgtacatgttcgtatcgaatcaagccaaactacggttgagtcaatcgaa
cagcgtttcgtacaagtatcacaacacaacaaacttgaagccttagtacgtgtattagaa
gttgaaaacactgaaggtgtaatcatattcgtgcgtactcgtaactcatgtgttgagtta
gctgagaagttagaagcccgcggttatgcttcatcaccactacacggtgacatgaaccag
caagcccgtgagcgtgcagttgaccaactgaaacgtggcaagttagacattctgatcgcg
actgacgttgcggcccgtggtcttgacgttgagcgtatcggtcacgttgtaaactacgat
attccgtatgatgctgaagcttatgtacaccgtattggccgtacaggccgtgctggccgt
actggtatggcgatcctgtttgtaactagccgtgaaatgcgcatgctgcgcactatcgag
cgttcaacgaacagccgcatttcaccaatgaaaatcccaagcccagagactgttgcagaa
cgtcgtctgtctcgcttaggtgagcaattggctgaaacaatcaacggcgatttagatttt
atgaaagaagctgttgctcaattatgccaacagttagaagtcgatactgatctgctagcc
gctgcattattacagcaagttcagcaagaacgtcctttgcaattgccagcaattcaagaa
cgtgttcgtgatgaacgcagtgagcgcactgaacgtagcgaccgcggaagtgatcgtaat
gaccgtggtggtgagcgtggtgaacgcagaagtcgcgaaccgcgtccaatgccagcaagc
ttaggctcagctgaagcgttgaaagacaacccagatttgaaaatgtgccgttacgtgatc
gacgtaggtcgtgagaatggtgtaggtgtgggtaacatcgttggcgctatcgcgaacgaa
gctaacatcgacagccgttacattggcgcaatccaactttacgatgcagtgaccactgtt
gacctgccagacggcatgccaaaagacgtgttacagcacctacgtaaagtacgtgtttgt
ggcaagccattgaacatccgcgaagctggcgatcaagtatttgttgattcaggccgtagt
gctcgttcagaccgccctgctggtgaccgtaaaccacgtggtgatcgtccaacgggtgac
cgcccagctggtgaccgtaagccacgcgctgcgtctactggtgacaagccatttgctgac
cgcaaaccacgtgcagacaagcctgctggtgagcgtaagccacgtaaaccacgtgaagac
taa |
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