KEGG   Shewanella baltica OS155: Sbal_3941
Entry
Sbal_3941         CDS       T00478                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
sbl  Shewanella baltica OS155
Brite
KEGG Orthology (KO) [BR:sbl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbl03400]
    Sbal_3941
Enzymes [BR:sbl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Sbal_3941
DNA repair and recombination proteins [BR:sbl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Sbal_3941
SSDB
Motif
Pfam: UvrD-helicase AAA_19 Zn_ribbon_Top1 UvrD_C UvrD_C_2 AAA_30 AAA_12 AAA_11 ResIII
Other DBs
NCBI-ProteinID: ABN63411
UniProt: A3D9J8
LinkDB
Position
4634592..4637606
AA seq 1004 aa
MSLTHSEQDIKHSWFGHFFIGKADAVKLSACGISINRTKGGFFAHSRSANEVAADEHFTW
QQLDSPPVFTLSPLGYLLSFTVSGKAYQLPFLSYFAQHQFGNEIALLWANANGARIAELV
AKVDKILAHTYLRESRLAMIQARVAREYQRWFPWCENLPLSAHLHTVLVRLKQIHRWTRA
DVKHLREDYVQSQLVKFADYFEHVESNPLTEKQRRACIIDDNNNLLLAGAGTGKTSVMVG
RAGYLLKSGQAKADDILLLAYGRKAADEMDERIKNKLGTEDIKASTFHSLGLKIIADVER
AKPSLSPWAEDDKAKELWVHHTLETLIEDEAYRKQLFEYFSRFYYVEKSPFEFEVEGEYF
QYLNDNDIRTLKGERVKSFGELYIANWLFSNGIEYVYEAKYEHDVRSIDFRQYQPDFYLP
EYQVYLEYYGIDEHQHTAPYIDNHRYLESMAWKRKLHKQHGTKCVELFYYQHKNGSLIGK
LEQALQVFKVQYAPLPDEAILATLHELGRVTELAKMFSQLIGLYKAACLDEHGLDGVFAR
AADAQQTRKAFELLEPIITRYEQHLAINGDIDFEDMIGKALTYLQRGQFISPWRFIMVDE
FQDISEPRARLVRALRDSCAPHSKAQASLFCVGDDWQAIYRFSGADVSLTTQFTHYFGPT
ARNDLDLTFRFNSSIGQVATQFVTQNPTQLSKDIRSLTQVTSPAVSILRRGENEPPSKDE
PSPNALEQALTAISARISAGSDKLNSVPSVYLLARFWFQLPDKTQVNQLKTKYPNMKIEC
QSFHASKGKEADYVVIMGMKTGMHGFPSMKITPPILDAFLPKTEAFEFAEERRLFYVALT
RTKHRAYVIADMTDVSPFVTELLTKDYPIEQDEFSTSLVQRLFKEVKCVRCSTGMLKPRT
GNFKSFYSCSHFPLCDHKEQGCELCASPMTRNHFAGFKVCLNEACGHISPLCNLCGGDMQ
LKDGRFGPFWACRNYRGQNLPSCTNTLNKAKLSIPSERPQKHVS
NT seq 3015 nt   +upstreamnt  +downstreamnt
ttgtcattgactcactctgaacaagatatcaagcacagttggtttggccatttctttatt
ggcaaagctgatgcggtaaaactcagcgcctgtggtattagcattaatcgcactaaaggc
ggcttttttgctcactctcgcagcgctaatgaagttgccgctgacgaacattttacttgg
cagcagctcgactccccgccggtttttaccttgagtccgctcggatacttgctcagtttc
actgtatctggcaaagcctatcaactgccgtttctaagctattttgcgcagcatcaattt
ggcaacgaaatcgcactgctttgggcgaatgctaatggggcgcgcattgctgagttagtg
gcgaaagtcgataaaatactggcacacacttatttacgtgaatcacgtttagcaatgata
caagccagagtcgcgcgcgaatatcagcgttggttcccttggtgtgaaaacctgccattg
tctgcacatttacacacagtgttagtgaggcttaagcaaatccaccgctggacccgcgcc
gatgtaaagcatctgcgtgaagattacgttcagtcacagctcgttaaatttgcagactat
tttgagcatgtagaatctaatcccttaaccgaaaaacagcgccgagcttgtattatcgat
gataacaataacttattattggccggtgcaggcacgggcaaaaccagtgtgatggtcggg
cgagccggatatttgctgaagagtggtcaagcaaaagccgatgacatattgctattagcc
tatggccgtaaagcagctgacgagatggatgaacggattaaaaacaagcttggcacggag
gatatcaaggcgagcactttccacagtttaggcttaaaaattatcgccgacgttgagcgc
gctaaacccagtttgtccccttgggcagaggatgacaaagccaaagagctgtgggtgcac
catacccttgagactttgattgaagatgaggcttaccgtaagcagcttttcgagtacttc
agccgcttctattatgttgaaaaaagcccgttcgagttcgaggtggaaggtgagtatttt
caatacttgaatgataacgatattcgcacccttaaaggtgagcgagtcaaaagctttggt
gagctctacattgccaactggctatttagcaatggcattgaatatgtttatgaagctaag
tatgagcatgatgtgcgcagtattgattttcgtcagtatcaacccgatttctatctgcct
gaataccaagtttatcttgaatactatggtattgatgaacaccagcataccgccccttat
atcgataaccataggtacttggaatcgatggcatggaaacgcaagctacataaacaacat
ggtactaagtgtgttgaactattttattaccaacataaaaacgggtcgttaatcggtaag
cttgagcaagctttacaggtctttaaagtgcaatacgcgcccttacccgatgaagccata
ctcgccaccctgcatgaactaggccgcgtgactgaattggcaaaaatgtttagtcagctg
attgggctgtataaagcagcttgccttgatgaacatggccttgatggggtatttgcccgc
gccgccgatgctcagcagacccgtaaggcattcgaactgcttgagcccataatcacgcgc
tatgagcaacatttagcaataaatggcgacattgattttgaggacatgattggcaaagcg
ctgacgtatctacaacgcgggcaatttattagcccgtggcgttttattatggtggatgag
ttccaagatatttcagaaccacgtgcccgcttagtgcgtgccttgagggattcctgtgcg
ccccattctaaagcgcaggcgtctttattttgtgtcggggatgactggcaggcgatttat
cgctttagcggcgcagatgtgagtttaaccacgcaatttactcactattttggcccaacc
gcccgaaacgacttagacctgacttttaggtttaacagcagtattgggcaagtcgccacc
cagtttgtcacccaaaatcccacacaattgagcaaggatattcgctccctcacgcaggtc
acctcccccgcggtttcaatattacgccgcggagaaaatgaaccacccagtaaagatgaa
ccaagcccgaatgcattagaacaagcattaacggcgataagtgcaaggataagcgccgga
agtgacaaacttaacagcgtaccgagcgtctatttgttggcacgtttctggtttcagtta
cccgataaaacccaagttaaccaacttaaaactaagtaccccaacatgaagattgagtgc
caatcttttcatgcttcgaaagggaaagaagccgattatgtggtgatcatggggatgaag
acgggaatgcatggctttccgtcgatgaaaattacgccgccgatactggatgctttttta
cctaaaactgaagcgtttgaatttgcagaagaacgccgactattttatgtcgcattaacg
cggacaaaacaccgtgcctatgtgattgccgatatgacagatgtgagtcctttcgtcact
gaactgcttacaaaagactacccaattgaacaagatgagttcagcacctctttagtacaa
aggttatttaaagaagtaaaatgcgtgcgttgcagcacgggaatgcttaagcctagaacg
ggaaattttaaatcgttttattcttgctcacactttcccttgtgcgatcacaaggagcaa
ggctgcgaactctgcgctagcccaatgacgcgtaaccattttgcaggctttaaggtgtgc
ctaaatgaggcttgtggacatatatcaccgctttgtaacctctgcggcggcgatatgcag
ttgaaagatggtcgattcggccccttttgggcctgtcgcaattaccgcgggcaaaaccta
cccagttgtacgaatacactaaacaaggccaagttatcgatcccaagcgagcgaccccaa
aagcatgtgagttag

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