Shewanella baltica OS155: Sbal_4145
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Entry
Sbal_4145 CDS
T00478
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sbl
Shewanella baltica OS155
Pathway
sbl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Sbal_4145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbl03021
]
Sbal_4145
03400 DNA repair and recombination proteins [BR:
sbl03400
]
Sbal_4145
Enzymes [BR:
sbl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Sbal_4145
Transcription machinery [BR:
sbl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Sbal_4145
DNA repair and recombination proteins [BR:
sbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Sbal_4145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ABN63610
UniProt:
A3DA47
LinkDB
All DBs
Position
complement(4865106..4866095)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVNSTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEILLNLKGLAVTIEGKDEAMLTLSKSGAGPVIAADITHDGD
VTIVNPDHIICHLTGNNDISMRIRVERGRGYVPASARAQTEDDDRPIGRLLVDASFSPVA
RIAYNVEAARVEQRTDLDKLVIDMTTNGTIDPEEAIRRSATILAEQLDAFVELRDVTEPE
LKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASLADDL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttcttaaaccgcgtctcgttgatatcgagcaggttaac
tcaacacgtgccaaggttacattggaaccacttgagcgtggtttcggccacactttaggt
aacgcgttgcgtcgcatcctattgtcgtctatgcccggctgcgcggttaccgaagtcgag
attgacggtgtactgcacgaatacagcagtaaggaaggcgttcaagaagatatccttgag
atcttgttaaacctgaaagggttagcagtgactatcgagggtaaagacgaggctatgctt
acgttgagcaagtccggcgcaggccctgtcatcgcagcagatatcacgcatgatggtgat
gtcactatcgtgaatcctgatcatattatctgtcacctgacaggtaacaatgatatcagc
atgcgtattcgcgttgagcgtggtcgtggctatgtaccagcatctgctcgtgcacagact
gaagacgatgatcgcccaatcggccgcttgctggttgatgcttctttctcgccagttgca
cgtattgcctacaatgtagaagctgcacgtgtagaacagcgtactgacttagataaactc
gttatcgatatgaccacaaacggtactatcgatcctgaggaagctatccgtcgttctgca
actattctggctgaacagctagatgcgtttgttgaattacgtgacgtgactgagccagag
ctgaaagaagagaaaccggaattcgatccgattctgctgcgtcctgtcgacgatttagag
ctaactgtacgttcggctaactgcttgaaagccgaagcgattcattacatcggagatctg
gtacagcgcactgaagttgagttgctgaagacccctaacttaggtaagaaatctcttact
gaaattaaggacgttttagcttctcgcggactgtcgttaggtatgcgtttggaaaattgg
cctccagccagtttagcagacgacctataa
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