Shewanella baltica OS155: Sbal_4274
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Entry
Sbal_4274 CDS
T00478
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbl
Shewanella baltica OS155
Pathway
sbl00061
Fatty acid biosynthesis
sbl00071
Fatty acid degradation
sbl01100
Metabolic pathways
sbl01212
Fatty acid metabolism
sbl02024
Quorum sensing
sbl04146
Peroxisome
Module
sbl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sbal_4274
00071 Fatty acid degradation
Sbal_4274
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sbal_4274
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sbal_4274
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbl01004
]
Sbal_4274
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbl04147
]
Sbal_4274
Enzymes [BR:
sbl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sbal_4274
Lipid biosynthesis proteins [BR:
sbl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sbal_4274
Exosome [BR:
sbl04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sbal_4274
Exosomal proteins of breast cancer cells
Sbal_4274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Cas9_C
Motif
Other DBs
NCBI-ProteinID:
ABN63739
UniProt:
A3DAH6
LinkDB
All DBs
Position
complement(5001788..5003593)
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AA seq
601 aa
AA seq
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MSLDQYHVIRLLQQQSESLKDAIALEGFEMAAPWYQVSWQAFDQISSKIAQVLIELGVQV
QDRCVILAQNCPQWTCADVGTLKSRAVVVPIYPTSTLEQASFIVNDAAAKVIFVDDAKQY
AMACELQSLCPSLEHVIVFDASVALAADKAEQHWHLDALLAGDAKAIKQEVELNQRLQAA
NLDDLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDQKLAFHSGDVSLAFLPLSHVFERS
WSFYVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAVQDKVAKSADGRKK
LFAWAMRVGQRQFEVGQGRAKGGLWLSLQWRLAHKLVYSKLQAVLGGRLKFMPCGGAALD
VNVGSFFHAINIPVLCGYGMTETNATVTCNTLGNRVPGSNGQPLLETEIKLGKDDEILVR
GATVMRGYYNRPEDTAAAFEDGWLKTGDAGRFDANGNLFITDRIKELMKTSNGKYIAPQR
VEGAVGCCPFIEQVAIIADARNYVTALIVPAFESLEAWAKDKGLKYESPLELLRHSHVVE
HFEQRLKQLQHELAGFEQIKKFTLLPEVFSMEAGLITPTLKLRRKMIYHKYAHEINAMYN
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgatcaatatcatgttattcgactattacagcagcagagcgagtctttaaaa
gacgcgatagcgctggaaggttttgaaatggccgctccttggtatcaggtgagctggcaa
gcctttgaccaaattagcagtaaaattgcacaagtgttgatcgaacttggcgtacaagtg
caagaccgttgcgttattttggcgcaaaactgcccacagtggacctgtgccgatgtcggt
acacttaaaagtcgcgccgttgtggtgccgatttaccccaccagtaccctcgaacaggcg
agctttatcgttaacgatgcggcggcgaaagtcatttttgtcgacgatgctaagcaatac
gctatggcctgcgagcttcaaagcttatgcccaagcctagagcatgtgattgtttttgat
gccagcgtggcacttgccgctgacaaagctgagcagcattggcatttagatgcgctgcta
gcgggtgatgctaaagcgattaagcaagaagttgagcttaaccagcgtttacaagcggct
aatctcgatgatttactgaccctcatttatacctctggcacgactggcgatcctaaaggc
gtgatgctggattaccgcaatatggcctcgaccatacgtcaacacgatcaaaaactggct
ttccattctggcgatgtgtctttggcattcttgcccttgagccatgtctttgagcgcagt
tggagtttttacgttctgtgccgtggcggtcataacgtctatttgcaaaatacccaaaga
gtgaaagaggcgattagcgccgtgcgtccgcacaccttgtgtgtggtgccgcgtttcctc
gaaaaagtgtacagcgccgtacaagataaagtcgccaagtcagccgatggccgtaagaag
ttgtttgcttgggcgatgcgtgttggtcaacgtcagttcgaagtcggtcaaggtcgtgct
aagggcggattatggttgtcgctgcaatggcgtttggcccacaaacttgtgtatagcaag
ctgcaagccgtgcttggcgggcggttgaagtttatgccctgcggtggcgcggcgttagat
gtgaatgtcggtagcttcttccatgcgattaatattcctgtgctgtgtggttacggtatg
acggaaaccaacgcgaccgtgacctgcaataccttaggtaatcgagtgccaggttctaat
ggtcaacctctgctggaaaccgaaatcaagctaggcaaggacgatgagattttagtccgc
ggcgcgactgtgatgcgtggctattacaatcgaccagaagataccgccgccgccttcgaa
gacggttggttaaaaaccggcgatgcagggcgtttcgatgcgaacggtaacttatttatt
accgaccgtatcaaagagttaatgaaaacctctaacggcaaatatatcgcgccgcaacgg
gttgagggtgcagtgggctgttgtccttttatcgaacaagtggcgattattgccgatgcg
cgtaattatgtgaccgctttaattgtgccagcgtttgaatcactggaagcgtgggcgaag
gacaaagggctgaagtatgagtcgcctttagaattgctacgccatagtcatgtggttgag
cattttgaacaacgtctcaagcagttgcagcatgaattggcgggttttgaacagatcaaa
aagttcacgctgttgccagaagtcttctcgatggaagcgggtttaatcaccccaacgctc
aagctgcgccgtaagatgatttatcataaatacgcccacgaaattaatgctatgtacaac
agctga
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