Shewanella baltica OS155: Sbal_4564
Help
Entry
Sbal_4564 CDS
T00478
Name
(GenBank) hypothetical protein
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
sbl
Shewanella baltica OS155
Pathway
sbl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sbal_4564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbl03400
]
Sbal_4564
Enzymes [BR:
sbl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Sbal_4564
DNA repair and recombination proteins [BR:
sbl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sbal_4564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABN63927
UniProt:
A3D4W1
LinkDB
All DBs
Position
pSbal01:96788..100570
Genome browser
AA seq
1260 aa
AA seq
DB search
MLKLIQSNQMEVLCAHLAAYLTQRLAFARLLSNEHILVQSPGMSTWLRLEIAKQNGIAAA
LEFPLPSSFTWQLCHDLLPDVPKDNAFTKAAMTWKLMQLLPRMLQDDTFGPLRHYLGNTL
ENTPTTNTADTSEHFNISDMTADDIKLYQLCGRIADIFDQYLVYRPDWILAWEQNEHPES
LTKSLNEDQRWQPILWRALIAFNRDELNQSHYHRANLHSDLIAALNNPDTSLAKLPQRLF
VFGISSMAPQTLEVLYHLAGRIDVIVLGLSPCQHYWGDIVDPRNRARMAVQYAGKRQLAE
LWEDKLEVGNPLLANNGKMGRELLDMLLELPAEHCDFGDDVYCEPCDDPNSPHSHASMLH
GVQYDILEMQTLDRVLGPDAELYQNVKNRRLLKRDDESIRVKSCHSPLREVETLHDHLLE
LLSNDVDLTPKDIVVMMPDVAAYAPYIDAVFSAKQDLHYIPYAIADRGAAQESPLINSFL
NLLGINQSRFGLTDILSILEVPAILRRFQLDDDELQLIRRWLDEAGVRWGRDEQSRLKQG
VPAFEQNSWAFGIKRLILGYALSDDAPLYQDHLIVTGIEGQSAQALGKLLNFIEVLDETA
QILALPQVGALRLAELTDLLDAFYDTDEDEREQLQEIRDAIAALEQELLSAGKPLDTNSL
DTSMFEKLAQQSISGLSLSIEVLQQWFNQRLTESRVGQRYLAGSVNFCTLMPMRSIPFKV
VCLLGMNDGVYPRVQHPVGFDLMAHFGARKGDRSRRLDDRYLFLEALLSAREQLYISYIG
RSERDNSERIASMLVSELIEYCQLCYLPETLLAQSQKVSSPIDPEDAEKALYKAIVSHQP
LQPFDPKLYQAAVKSDDEDGSSIGQSYSQQWCPPNAAAAGTHAGRFIGAQTRILLEADEQ
DSMLQAVPLPTPQQQSKQVDVSALIRFFRNPAQYFFNRTLKVDLSLNIQADDNDEPFSLN
ALERYMLQAQLLDDAISQGLTEPDIELIKRLKASGSLPMQPFDDLLLRQYQHDIKPLIGR
TLFLKGEQASSHADIKLLFDLPITAGKSQQVLLQGRIDDISPKGLVNYRPGSAHGRDVLR
LYLRHLCLMAMGHTHASYLLDMGHFHALAPITAERAHALLADLLVLFYQGQQYPLCFMPR
TSLAYVSCEGEHDERLQQALPEWLDEQSQLGEGSEPHYQRLFSFPRDFSEGSFGAFAERI
CRPMVSLYLKDTLAQLEEFALNDGMSQGQTPNVQATETQATETRATAAHLNRDSAQGEQA
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagttaatccagtccaatcagatggaagtgctctgcgcccatttagccgcttac
ctgacccaacgccttgcttttgcacgtctactgagtaacgagcatattctggtgcagagt
cctggcatgtcgacttggctgcgcctcgaaatcgccaaacaaaatgggattgctgccgca
ttggaatttccgctgccatcgagctttacttggcagttgtgccatgacttattacccgat
gtgcctaaggacaacgccttcactaaggcggcgatgacgtggaagctgatgcaactcttg
ccgcgcatgttacaagatgacacctttgggccattgagacactatctaggtaatacccta
gaaaatacgcctaccacaaataccgccgacacaagtgaacatttcaacatcagtgatatg
acggctgacgacattaagctgtaccaactctgtggccggatcgccgatatcttcgaccaa
tacttagtgtatcgccccgattggattttagcgtgggagcaaaacgagcatcccgaatca
cttaccaaatcgctgaatgaagaccaacgctggcaacctattttatggcgcgcactgatt
gcctttaaccgtgatgagcttaatcaaagccattaccacagagccaatctgcacagcgac
ttaattgccgcgctgaataatcccgacacgtcactcgccaaattgccgcaacgcttattt
gtgtttggcatttcctcaatggcgccgcaaaccctcgaagtgctttaccatctggcagga
cgtatcgatgtgatcgtgctgggtttaagcccgtgtcaacactattggggcgacattgtt
gatccccgtaatcgtgcccgcatggcggtgcaatatgcgggtaaacgtcaattagcagaa
ctatgggaagataaactcgaagtaggcaatccgctgcttgccaataacggcaagatgggc
cgtgaattactcgatatgctgcttgagctccccgccgaacactgcgactttggcgacgat
gtgtattgtgagccctgcgacgatcccaactcgccacacagtcatgccagcatgctccac
ggggtgcaatacgatattttagagatgcaaaccttagacagagtgctagggcctgatgcc
gagctgtaccaaaatgtcaagaacagacgcctgcttaagcgcgacgatgaatccattcga
gtcaagagttgtcacagtccactgcgggaagtcgaaaccctgcacgatcacttgcttgag
ttactcagtaatgatgtagacctgacacccaaagacatagtggtgatgatgcccgatgtc
gccgcctacgcgccctatatcgatgccgtcttctcggcgaagcaagatctgcattacatt
ccctacgccattgccgaccgaggcgcagcgcaggaatcaccgctcatcaatagcttttta
aatttacttggaattaatcaaagtcgttttggtctgaccgacattttgagcatactcgaa
gtgcccgccattttgcgccgtttccagctcgatgacgatgaattgcaacttatccgccgc
tggttagatgaagcgggcgtgcgctggggccgcgatgagcaaagccgcctaaaacaaggg
gtgccagcgtttgagcaaaactcctgggcctttggtattaaaaggctgattttaggttac
gccttgagtgacgatgcgccgctgtaccaagaccatctgatcgtgactggcatcgaaggc
caatcggcgcaggcgttaggtaagttactcaattttattgaagtactcgatgaaacagcg
caaatactcgccctgccgcaagtgggcgccctgcgtttagcggaattaactgatttgctg
gatgccttctacgacacagatgaagacgagcgcgagcagttacaggaaatccgcgatgcc
atcgccgccctagagcaagagttactatctgcgggtaagccattggatacaaactcgtta
gatacaagtatgttcgagaagctagcccaacagagcataagcggactgagcctcagtatc
gaagtgctgcagcaatggtttaatcaacgcttaaccgaatctcgggtcggccagcgttat
cttgcgggaagcgtgaacttttgtaccttgatgccgatgcgctcgatcccctttaaggtc
gtgtgtttactcggcatgaatgatggggtgtatcctagggttcagcatcccgtcggcttt
gatttaatggcacactttggtgcccgtaaaggcgatcgttcccgccgtctcgatgacaga
tatttgtttttagaagccttattgtcggcgcgcgagcaactgtacatcagctacatcggt
cgcagcgaacgggataactctgagcgtatcgcctctatgctcgtctctgaactgattgaa
tattgtcagctgtgctatttgcctgaaacactattggctcaatcgcagaaagtttcaagc
cccatagacccagaggatgctgaaaaagccctctataaagcgatcgtcagccaccagccg
ctgcaacccttcgatcctaagttgtatcaagccgcagtaaaaagtgatgacgaagatggc
tcaagcataggccaaagttacagccagcaatggtgtccgcccaatgcggcagcggcaggc
acacatgcgggccgctttatcggcgcgcaaactcgcatcctgctcgaagcggatgagcaa
gactcaatgctacaggccgttccactgcccactcctcagcagcaaagcaagcaagtggat
gtgtctgccctgatccgtttctttcgaaatccggcgcagtacttcttcaaccgcacgctt
aaagtcgatctcagccttaatattcaggccgatgataatgacgagccctttagcttaaat
gctctagagcgctatatgttgcaggcccagttactcgacgatgccataagccaaggtctg
actgagcccgatatcgagctgattaaacgcctcaaagccagcggcagtttgccgatgcag
cccttcgatgatttgctgctgcgccaatatcagcacgatattaagcctttgattggcaga
accttgttcctcaagggagaacaagccagtagtcatgcggatattaaactcctgtttgac
ttgcccatcacggcgggcaaatcccagcaagtgttactgcaaggccgtatcgatgacatc
agccctaagggattagtgaattaccgtcccggtagcgcccatggtcgcgatgtgctgagg
ttgtaccttcgtcacctgtgtttaatggcaatgggccacacacatgcaagctatctactc
gacatggggcatttccacgccttagcgccaatcactgctgagcgcgcccatgcgttactg
gccgatttattggtgctgttttaccaaggtcagcaatatccactgtgttttatgccgcgc
acctcactggcctacgtcagctgcgagggtgagcacgatgagcgtttgcagcaagcgtta
cctgaatggctggatgagcagagtcaattaggcgaagggagcgaaccccattaccaacgc
ttattcagttttccgcgggatttctctgagggcagctttggcgcatttgccgagcgcatc
tgtcgccctatggtgagtttatatctcaaagatacgctggctcagcttgaggaatttgcg
ctgaacgatggcatgagccaaggccaaactcccaatgtacaagcgactgaaacgcaagcg
actgaaacacgagcgactgcagcacatttgaaccgcgatagcgcacagggagagcaagca
tga
DBGET
integrated database retrieval system
