Shewanella baltica OS185: Shew185_0075
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Entry
Shew185_0075 CDS
T00571
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm00061
Fatty acid biosynthesis
sbm00071
Fatty acid degradation
sbm01100
Metabolic pathways
sbm01212
Fatty acid metabolism
sbm02024
Quorum sensing
sbm04146
Peroxisome
Module
sbm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Shew185_0075
00071 Fatty acid degradation
Shew185_0075
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Shew185_0075
09145 Cellular community - prokaryotes
02024 Quorum sensing
Shew185_0075
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbm01004
]
Shew185_0075
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbm04147
]
Shew185_0075
Enzymes [BR:
sbm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Shew185_0075
Lipid biosynthesis proteins [BR:
sbm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Shew185_0075
Exosome [BR:
sbm04147
]
Exosomal proteins
Exosomal proteins of breast milk
Shew185_0075
Exosomal proteins of breast cancer cells
Shew185_0075
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Cas9_C
Motif
Other DBs
NCBI-ProteinID:
ABS06248
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Position
95731..97536
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AA seq
601 aa
AA seq
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MSLDQYHVIRLLQQQSESLKDAIALEGFEMAAPWYQVSWQAFDQISSKIAQVLIELGVQV
QDRCVILAQNCPQWTCADVGTLKSRAVVVPIYPTSTVEQASFIVNDAAAKVIFVDDAKQY
AMACELQSLCPSLEHVIVFDASVALAADKAEQHWHLDALLAGDEKAIKQEVELNQRLQAA
NLDDLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDQKLAFHSGDVSLAFLPLSHVFERS
WSFYVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAVQDKVAKSADGRKK
LFAWAMRVGQRQFEVGQGRAKGGLWLSLQWRLAHKLVYSKLQAVLGGRLKFMPCGGAALD
VNVGSFFHAINIPVLCGYGMTETNATVTCNTLGNRVPGSNGQPLLETEIKLGKDDEILVR
GATVMRGYYNRPEDTAAAFEDGWLKTGDAGRFDANGNLFITDRIKELMKTSNGKYIAPQR
VEGAVGCCPFIEQVAIIADARNYVTALIVPAFESLEAWAKDKGLKYESPLELLRHSHVVE
HFEQRLKQLQHELAGFEQIKKFTLLPEAFSMEAGLITPTLKLRRKMIYHKYAHEINAMYN
N
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgatcaatatcatgttattcgactattacagcagcagagcgagtctttaaaa
gacgcgatagcgctggaaggttttgaaatggccgctccttggtatcaggtgagctggcaa
gcctttgaccaaattagcagtaaaattgcacaagtgttgatcgaacttggcgtacaagtg
caagaccgttgcgttattttggcgcaaaactgcccacaatggacctgtgccgatgtcggg
acgcttaaaagtcgcgccgttgtggtgccgatttaccccaccagtaccgtcgagcaggcg
agctttatcgttaacgatgcggcggcgaaagtcatttttgtcgacgatgctaaacaatac
gctatggcctgcgagcttcaaagcttatgcccaagcctagagcatgtgattgtttttgat
gccagcgtggcacttgctgctgacaaagctgagcagcattggcatttagatgcgctgcta
gcgggcgatgagaaagcgattaagcaagaagttgagcttaaccagcgtttacaagcggcc
aatctcgatgatttactgaccttaatttatacctctggcaccacgggcgatcctaaaggc
gtgatgctggattaccgcaatatggcctcgaccatacgtcaacacgatcaaaaactggct
ttccattctggcgatgtgtctttggcattcttgcctttgagccatgtatttgagcgcagt
tggagtttttacgttttgtgccgtggcggtcataacgtctatttgcaaaatacccaaaga
gtgaaagaggcgattagcgccgtgcgtccgcataccttgtgtgtggtgccgcgtttcctc
gaaaaagtgtacagcgccgtacaagataaagtcgccaagtcagccgatggtcgtaagaag
ttgtttgcttgggctatgcgcgttggtcaacgccagttcgaagttggccaaggtcgtgct
aagggcggattatggttgtcgctgcaatggcgtttggcccacaaacttgtgtatagcaag
ctgcaagccgtgcttggcgggcgtttgaagtttatgccctgcggtggcgcggcattagat
gtgaatgtcggtagcttcttccatgcgattaatattcctgtgctgtgtggttacggcatg
acggaaaccaacgcgaccgtgacttgcaataccttaggtaatcgagtgccaggttctaat
ggtcaacctctgctggaaaccgaaatcaagctaggcaaggacgatgagattttagtccgc
ggcgcgactgtgatgcgtggctattacaatcgaccagaagataccgccgccgccttcgaa
gacggttggttaaaaaccggtgatgcgggacgtttcgatgcgaacggtaacttatttatt
actgaccgtatcaaagagttaatgaaaacctccaacggcaaatatatcgcgccgcaacgg
gtagagggcgctgtgggctgttgtccttttatcgagcaagtggcgattattgccgatgcg
cgtaactatgtgaccgccttaattgtgccagcgtttgagtcactggaagcgtgggcgaag
gacaaagggctgaagtatgagtcgcctttagaattgctacgccatagtcatgtggttgag
cattttgagcagcgcttaaagcagttgcagcatgaattggcgggttttgaacagatcaaa
aagttcacactgttgccagaagccttctcgatggaagcgggtttaatcaccccaacgctc
aagttgcgccgcaagatgatttatcataaatacgcccacgaaattaatgctatgtacaac
aactga
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