Shewanella baltica OS185: Shew185_0349
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Entry
Shew185_0349 CDS
T00571
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm00061
Fatty acid biosynthesis
sbm00071
Fatty acid degradation
sbm01100
Metabolic pathways
sbm01212
Fatty acid metabolism
sbm02024
Quorum sensing
sbm04146
Peroxisome
Module
sbm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Shew185_0349
00071 Fatty acid degradation
Shew185_0349
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Shew185_0349
09145 Cellular community - prokaryotes
02024 Quorum sensing
Shew185_0349
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbm01004
]
Shew185_0349
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbm04147
]
Shew185_0349
Enzymes [BR:
sbm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Shew185_0349
Lipid biosynthesis proteins [BR:
sbm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Shew185_0349
Exosome [BR:
sbm04147
]
Exosomal proteins
Exosomal proteins of breast milk
Shew185_0349
Exosomal proteins of breast cancer cells
Shew185_0349
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
SH3_1
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABS06519
LinkDB
All DBs
Position
complement(390466..392130)
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AA seq
554 aa
AA seq
DB search
MDTAIKTPIEMLAHWAKTQGDQVYLRQPIKGQFLDFTWAEVQEKVQQLAGALQHLGLERG
DKIAVLSKNCAEWFITDLALMHGGYVSVPIYPTANTDTIRYVLQHSGAKAIFLGKLDHWA
DQEAGVGGELLRLAMPYDTMPAQYQWEQLLKLGYPLVDAPLPTSDQVMTLIYTSGSTGQP
KGAIQTFASYGWTCQAVVRDLRTDGNDRLLSYLPLAHITERVAIEGSSFYSGSVVAFVES
LDSFVADVQRAKPTVFFSVPRLWSLFQKNIIDKIGVSKLNLLLKIPLISSLVKHKIHKGL
GLNHCRLLGSGSAPIPPSLIHWYHSIGLNICEAWGMTENCAYSIINYPFDASKIGTVGRP
VEDCQIRQGEDGELLLKSPGLMTAYYLQPEATAAAFDADGFFHTGDLCSIDADGCVTITG
RVKDNFKTAKGKYVAPVPIERKLAQDPHVELICVIGSGLPHPVALVQLSEGASLQAREEV
RASLKATLDSVNPHLESHEHVDAIIVVNDPWTIENDVLTPTLKIKRHVLEKAFSERVDGI
RGAQVRWEDELTQK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggatacagcgattaagacgccaattgaaatgctggcgcactgggctaagactcagggg
gatcaagtctatttacgccaacctatcaagggtcaattccttgattttacttgggccgaa
gttcaagaaaaagtgcaacaactggccggtgccttacagcatctaggcctagagcgcggt
gataagattgccgtactctctaaaaactgcgccgaatggtttatcaccgaccttgcgtta
atgcacggcggctatgtcagcgtgccgatttacccaacggccaacacagatactattcgc
tatgtgctgcaacacagcggtgcaaaagccattttcctcggtaagctcgaccattgggcc
gaccaagaagccggtgtcggcggcgagctgctacgtcttgctatgccctacgatacaatg
ccagcccaatatcaatgggaacaattacttaaactaggttatcccctagttgatgcgccg
ctgccgacgtctgatcaagtgatgacacttatctatacctctggctcaacgggtcaacct
aagggcgcgattcaaaccttcgctagctatggctggacttgccaagcggtagtgcgtgat
ttacgcaccgacggcaatgacagactgttatcctatttgcctttagcgcacatcacagag
cgcgtcgcgattgaaggttcatccttctattccggcagcgtggtcgccttcgtcgagagt
ctcgactccttcgtcgccgacgtgcaaagggcaaaaccgacggtattcttctcagtgccg
cgtttgtggagcctgttccagaaaaacatcatagacaaaattggtgttagtaaactgaat
ctattgctgaagatcccgttaatcagcagcttagtgaagcacaaaatccataaaggctta
ggtttgaaccattgtcgtttgctcggctctggctctgcgccgatcccgccgtcgctgatc
cactggtatcacagcattggtctgaatatctgtgaagcttggggtatgacagaaaactgc
gcctactcgattatcaactaccccttcgatgccagtaaaattggcacagtaggtcgcccg
gttgaggattgtcagatccgccaaggggaagatggtgagctactgcttaagagtccaggg
ttgatgacggcttattacctacagcccgaagccactgctgcagccttcgacgccgatggt
ttcttccacactggcgatttatgttctatcgatgccgatggttgcgtgaccattactggc
cgagtgaaggacaacttcaaaaccgccaagggtaaatatgtcgcgcccgtgcctatcgaa
cgtaaattggcgcaggacccgcatgttgaactgatctgcgtgattggctcaggcctgccg
cacccggtcgcattagtgcaattatccgaaggcgctagtttgcaggcccgcgaagaagtc
cgcgcttcactcaaagcgacacttgatagcgttaatccgcacttagagtcacacgaacac
gtcgatgcgattatcgtagttaacgatccttggacgattgagaacgatgtactgacaccg
acgcttaagatcaaacgccatgtgcttgaaaaagcctttagcgaacgagttgatggcatt
cgtggtgcccaagttcgctgggaagatgagttaacgcaaaaataa
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