Shewanella baltica OS185: Shew185_0625
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Entry
Shew185_0625 CDS
T00571
Name
(GenBank) MLTD_N domain protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbm01011
]
Shew185_0625
Enzymes [BR:
sbm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Shew185_0625
Peptidoglycan biosynthesis and degradation proteins [BR:
sbm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Shew185_0625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_OapA
LysM2_CERK1_LYK3_4_5
LysM1_NFP_LYK
SCP_3
Motif
Other DBs
NCBI-ProteinID:
ABS06786
LinkDB
All DBs
Position
complement(753286..754737)
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AA seq
483 aa
AA seq
DB search
MRKHFRQTHSFTVLMLAMFVAQLSGCATTSASPSTTEFSAPANDVSNGSDHSPQHQQHTP
PAVVEQYSDVWEKIQHANTIDVHDDAEVRKQRNFFDDKQKFMNQVGERAEPFLYYIVSQL
EARNMPLELALLPIVESGYNPLAQANGPAGLWQMIPATGRNFGLTVNSAYDGRKDALAST
DAVLDYLQHLYDTLDHDWINAVAAYNTGELVIKAAIDKNKAKGKPTDFWSLGIPAKRVQT
VPKWLAFIQIIRAPNHYNLKVRPIANRPYLDRVPAPNGVDIGQIANAAGLSKAEFKTYNP
GFRQGVIPIKGKYQIALPLENIGQYQENHDKLYAQKRYDSQSYIVKSGDSLGTIAAKFDT
SVKALKQANNLTSDRLKVGQELTLLTPMAANDNAPEPAKTNTKADSKVSSKLSTKANASG
TKAASSKSAEKPAAKAKTYKVKSGDSLDKIARKNKVKLADLMKWNQLNGKSIIKPGQELK
ISE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaacattttcgccaaacgcactcttttacagtgctaatgctggccatgttcgtg
gcccaattgagcggttgcgcgaccacgtcggcaagcccatcgaccacagaattcagtgcc
ccagcaaatgatgtgagtaacggtagcgaccactcgccacaacaccagcagcacacgcca
cccgctgtggttgagcagtacagcgacgtttgggaaaagatccaacacgccaataccatt
gacgtacatgacgatgccgaagtgcgcaaacagcgtaactttttcgatgataaacagaaa
tttatgaaccaagtcggcgaacgcgccgagccctttttgtattacatcgtcagccagctc
gaagcccgtaacatgccattagaattggcgttattacccatagtcgagagtggttacaat
ccactggcgcaggcaaatggcccggctggactgtggcagatgatccccgccacggggcgt
aattttggcttaacggttaactctgcctacgacggtcgcaaagatgcgctggcctcaacc
gatgccgtgctcgactatctacagcatttatacgacaccttagatcacgactggatcaac
gccgtcgcagcatacaataccggtgaattggtgattaaagccgccatcgacaagaacaaa
gccaagggtaaaccgacggacttttggtcgctgggcattccggcgaaacgcgtacaaact
gtgcctaagtggctggcgtttattcaaattattcgcgcccctaatcattacaatctaaaa
gtacggccgatagctaaccgcccttacttggatagagtacctgcacccaatggcgtggat
atcggccaaatcgccaatgcggctgggctgagcaaggcagaatttaaaacctataaccct
ggctttcgccaaggcgtgatcccgatcaaaggcaaatatcaaatcgccttaccgctggaa
aacataggtcaatatcaagaaaatcacgacaaactctacgcccaaaaacgctatgacagc
caaagctacatcgttaaatccggcgacagcctaggcacaatcgcggctaagtttgatacg
tcagtcaaagcattaaaacaggctaataatctgacctctgaccgtctcaaagtcggccaa
gagctcacactattaacgccaatggcagccaatgataatgcgcctgaacccgctaaaacc
aacactaaggccgatagcaaagtcagcagcaagttatcgactaaagcaaatgccagtggc
actaaagccgccagctcaaaatcggccgaaaaaccagcggcaaaagccaaaacctacaag
gtgaaatccggcgattcactggataaaatcgcccgtaagaataaggtcaaactggctgat
ttaatgaagtggaaccagctcaatggcaagagcattattaagccaggtcaagaactgaaa
atcagcgaataa
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