Shewanella baltica OS185: Shew185_0630
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Entry
Shew185_0630 CDS
T00571
Name
(GenBank) Microbial collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbm01002
]
Shew185_0630
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
sbm02042
]
Shew185_0630
Enzymes [BR:
sbm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
Shew185_0630
Peptidases and inhibitors [BR:
sbm01002
]
Metallo peptidases
Family M9
Shew185_0630
Bacterial toxins [BR:
sbm02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
Shew185_0630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
PPC
Motif
Other DBs
NCBI-ProteinID:
ABS06791
LinkDB
All DBs
Position
complement(763121..766333)
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AA seq
1070 aa
AA seq
DB search
MRFDASLGSTHQITPKEDLLCRLDNYGYTMKNTLLFAAISLAFATPVLAHDTHTSHPLGS
NTPSNPQAQPAPRPPSAPISQIESHRPLLRETPLMASPNEPTMTEQTMTEPPKMHSRKKR
EVSEQPPLKLQSRSAALQSNDCSDFVGKSGQALVDQLSQSTPECVGKLYSLKGSSATALF
SEANVISVANAIATKAKDYTGVDVQHLESHIYFVRAALYVQFYSPNDVPAYSSAAKASLK
SALNALFANAAIWTVSDDNAGVLKEALILIDSAELGADFNHVTIKVLTDYDANWQASFAM
NAAANSVFTTLFRAQWNDDMQALFARDQGILDALNNFQLEHRDLLGTNAEYLLVNSVKEL
SRLYYIDAMRPRVTQLVKNILSSTSKTEPSKVLWYAAAEMADYYDRSHCNDYNICGFKAQ
LEADTLPFNWKCSDSLKIRAQDLYQDQAKWACDVLTSQESYFHSKLETGMQPVGQDNNDD
LELVIFGSSSEYKSLANSIFGINTDNGGMYLEGSPAGLKNQARFIAYEAEWRTPDFHVWN
LQHEYVHYLDGRYNLFGDFSRGTSANTIWWIEGLAEYISYRDANTAAIAMGETGEFMLST
IFKNNYESGQDRIYRWGYLAVRFMFEHHRDDVRQILAYLRNDQYAEYQTFMDGIGTRYDN
EWQGWLASGLSTADDGIVDKGPSDVDAEPSGREGNWTGPAGTISKDYSPCQVTDEAYRYT
ESASLKIDVPMECIDSKLGRASFSFTNTDRSAQDLWIKIGGGWGDADIYFNSKGWASPEQ
NQGAGIGNGNYQVIKVQLNPDEYWHYITLSGDFGGVDMQVSTTELFADVDPDLGDGGVDP
EPPANCGAVTLDYGQLTLGKNECISGGRNSFYFWVEEDNTQFTVTTKGGSGDANLYFNAS
QWADADNADAKSTQVGNQESLSFSANRGWRYITVDTATEFSGVTLTLNTGASNTPTPALI
ANACTTQSPLSHGELSSGKAICTTDGRSDYYLWVPEGTSQLSINSAHGSGDVSLFSGTTW
ANAQHFDAASVTPANTQESITVDAPNVGWYYITVQSEPQSSGVALQVDLR
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttgatgcaagcttaggttccacgcatcaaataacgcccaaggaagatctgctt
tgcagactagataactacggatacacaatgaaaaacacactgctcttcgcagctattagc
ttagcttttgcgactcccgttctcgcccatgacactcatacgagtcacccattaggcagc
aacacacccagtaatccacaagcgcaaccggcaccacgaccaccctcggcgcccattagc
caaatagaatcccatagaccgctactgcgggagacgccattgatggcatccccgaatgag
ccaactatgacagaacagacaatgacagaaccgcctaagatgcattcacgcaagaagcga
gaagtatctgagcaaccgccacttaagttacagagtcgcagcgccgcactgcagagcaat
gactgcagtgactttgtcggtaaatcgggccaagccctagtggatcaattgagccaatcg
acacccgagtgcgtcggtaagctctatagcctcaaaggcagtagcgccaccgcgctattt
agcgaggccaatgtgatcagtgtcgccaacgccattgccactaaagccaaggactacact
ggggtcgatgttcagcatcttgaatcgcatatttattttgtccgcgccgccctctatgtg
cagttttacagcccaaatgatgtacccgcttacagcagcgccgctaaggccagcttaaaa
tcggccctcaacgctttatttgcgaacgctgcgatttggactgtttccgatgacaatgct
ggcgtgttgaaagaagccttaatcctgattgactctgccgagctcggcgccgatttcaat
catgtcaccataaaagtgctaacggactacgacgctaactggcaagccagtttcgccatg
aacgccgcagccaactcagtgtttaccaccttattccgcgcccagtggaatgatgacatg
caggcgctgttcgcacgtgaccaaggtattttagatgcgctaaataactttcaactcgaa
catcgtgacttgttaggcactaatgctgagtatctgttagtcaactcagtcaaagagtta
tctcggctgtattacattgatgccatgcgcccgcgagtgactcagctagttaaaaacatc
ctcagcagcaccagcaaaaccgaaccgagcaaagtgctttggtacgcggcggcagaaatg
gccgactattacgatcgcagccattgtaacgattacaatatctgtggctttaaggcgcag
ctagaggccgataccctaccgttcaactggaaatgctccgacagccttaagatccgcgcc
caagatctctatcaagatcaagccaagtgggcctgtgatgtgctgaccagccaagagagc
tatttccacagcaaacttgaaacgggcatgcaacccgtagggcaagataacaacgatgat
ttagagctagtgatatttggcagctcgtctgaatacaaatccttagcgaacagtatcttt
ggcatcaataccgacaacggcggcatgtaccttgaaggctcgcccgccggactcaaaaat
caggcgcgttttatcgcctatgaagccgaatggcgcacgccggatttccatgtctggaac
ctgcaacacgaatatgtgcactacctcgacgggcgctataacctgtttggtgactttagc
cgcggcacttcggccaatactatttggtggattgaaggcctagcggaatacatttcttac
cgtgacgccaataccgcggccattgccatgggcgaaaccggtgaatttatgttgtcgacc
atattcaaaaacaactatgaatcaggccaagaccgtatctaccgttggggttatctggcg
gtgcgctttatgtttgagcatcacagggacgatgtaagacagattctcgcctacctacgt
aacgaccaatatgctgaatatcaaacctttatggatggtattggcacacgttacgacaac
gagtggcaaggttggctcgccagcggcttgagcacggctgacgatggcatagtcgataag
ggcccaagtgatgtcgatgctgagcccagtggccgtgaaggcaattggactggtcctgcg
ggcactatcagtaaggattactcgccttgccaagtgacggacgaagcctaccgttacact
gaatcggccagcctgaaaatcgatgtgccgatggaatgtattgattctaaactcggtcgc
gccagtttcagtttcactaataccgatcgctcggcccaagatctttggatcaagattggc
ggaggttggggtgatgccgacatttatttcaattctaaaggttgggcaagcccagaacaa
aaccaaggcgcggggatcggcaacggtaactatcaagtcattaaagtgcagttaaaccct
gacgaatattggcactacattaccttgtcgggggattttggcggcgtcgatatgcaagtc
agcaccactgagttgttcgctgatgttgatcccgatctgggagatggcggcgtggatcct
gagccaccagcaaattgcggtgcagtaaccttagattacggccagctcacactgggtaaa
aacgagtgtatcagtggtggacgcaacagcttctacttctgggttgaggaagataatact
cagttcaccgtcaccactaagggcggctctggggatgccaatctttacttcaatgccagt
cagtgggccgacgccgataatgccgatgccaagagcactcaagtgggtaatcaagagtcg
ctaagttttagtgccaatcgcggctggcgttatatcacagtggacactgccactgagttt
agcggcgtcactctcaccctcaatacaggcgcgagcaacacacctacgccagctctaatc
gctaatgcctgcacgacgcaatcacccttgagtcatggtgagctgagttcaggcaaagcc
atctgcaccaccgatggtcgcagcgattactatctttgggtgccagaaggtacgagtcag
ttaagcatcaactcggcccacggcagtggtgatgtgagcctgttttcggggacaacttgg
gccaatgctcaacacttcgatgcagcgtctgtcacgcccgctaacactcaagaaagtatc
acagtcgatgcgccaaatgtggggtggtattacatcacagtgcagagtgaacctcagagt
tcgggtgtcgcactgcaagtcgatttacgctag
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