Shewanella baltica OS185: Shew185_0645
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Entry
Shew185_0645 CDS
T00571
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Shew185_0645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbm03019
]
Shew185_0645
03110 Chaperones and folding catalysts [BR:
sbm03110
]
Shew185_0645
03029 Mitochondrial biogenesis [BR:
sbm03029
]
Shew185_0645
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbm04147
]
Shew185_0645
Enzymes [BR:
sbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Shew185_0645
Messenger RNA biogenesis [BR:
sbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Shew185_0645
Chaperones and folding catalysts [BR:
sbm03110
]
Heat shock proteins
HSP60 / Chaperonin
Shew185_0645
Mitochondrial biogenesis [BR:
sbm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Shew185_0645
Exosome [BR:
sbm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Shew185_0645
Exosomal proteins of other body fluids (saliva and urine)
Shew185_0645
Exosomal proteins of breast cancer cells
Shew185_0645
Exosomal proteins of colorectal cancer cells
Shew185_0645
Exosomal proteins of bladder cancer cells
Shew185_0645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABS06806
UniProt:
A6WJ17
LinkDB
All DBs
Position
784424..786061
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEVVFGNDARVRMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPLITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVVEGLKAVAAGMNPMDLKRGI
DKAVIAAVAELKALSQPCADSKAIAQVATISANSDESIGEIIATAMEKVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGL
AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTV
IAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQTQIAARVSQIKQQVEESTSDY
DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RVASKIADVEVLNEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANTVKNGSGNYGYNA
GNDTYGDMLEMGILDPTKVTRCALQFAASIAGLMITTEAMVAEIPQNASQDMGGMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagttgtatttggtaatgacgctcgcgtaagaatgctggctggcgta
aacattctcgcaaacgcagtaaaagtgaccttaggccctaaaggccgtaacgtggtatta
gacaagagcttcggctcacctctgatcactaaagacggtgtgtctgttgccaaagaaatc
gagttagaagacaaattcgaaaacatgggcgcgcaaatggtgaaagaagttgcttctaaa
gccaacgacgccgccggtgatggtactactactgcaactgtactggctcaagccattgtt
gttgaaggcttaaaagccgttgcagccggtatgaaccctatggatctgaagcgcggtatc
gacaaagccgttatcgctgcagttgctgaattaaaagccttatcacaaccttgtgccgac
tcaaaagcgattgcacaagttgcgactatttctgcaaactctgacgaatctatcggcgaa
atcatcgcaactgcgatggaaaaagtcggcaaagaaggcgtgatcacagttgaagaaggc
caagcgttagaaaacgaattggacgtagtagaaggtatgcagtttgatcgtggctaccta
tctccatacttcatcaacaagccagaaaccggcagcgttgagttagaccacccattcgta
ctgttagtagacaagaaaatctctaatattcgcgaactgttacctatccttgaaggtctg
gcaaaaaccggtaagccattgcttatcgttgctgaagacgttgaaggcgaagcattagca
actttagttgtgaacaatatgcgcggtatcgtgaaagtggctgcggttaaagcacctggc
tttggcgatcgtcgtaaggcaatgctacaagacgtagcaatcctgactggcggtactgtt
attgctgaagaaatcggcctagagcttgaaaaagcaacgttggaagatttaggtactgct
aagcgtgttgtgatcactaaagacaacaccaccatcatcgatggtaacggcgagcaaaca
caaattgctgctcgtgtaagccaaatcaaacaacaagttgaagaatcaacttctgactac
gacaaagaaaaactgcaagagcgtatggctaaattagccggcggcgtagcagtaatcaaa
gttggcgcagcgactgaagttgaaatgaaagagaaaaaagcccgcgttgaagatgcactg
catgcaactcgcgctgcggtagaagaaggcgtggttcctggcggcggtgttgctctggtt
cgcgtagcttctaagatcgctgacgttgaagtattaaacgaagaccaaaaacacggtgtg
gttatcgcactgcgtgcaatggaagcgccactgcgtcaaatcgccactaacgcgggtgaa
gaagcgtcagttgttgctaacacagtgaagaacggcagcggtaactatggttacaacgcc
ggcaacgacacttacggtgacatgttagaaatgggtatccttgacccaactaaagtgacc
cgttgtgcattgcaattcgctgcgtcaatcgcaggtctgatgatcactacagaagctatg
gttgctgagatcccacaaaatgctagccaagatatgggcggtatgggtgggatgggcgga
atgggcggcatgatgtaa
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