Shewanella baltica OS185: Shew185_0683
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Entry
Shew185_0683 CDS
T00571
Name
(GenBank) uncharacterised P-loop ATPase protein UPF0042
KO
K06958
RNase adapter protein RapZ
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbm03019
]
Shew185_0683
Messenger RNA biogenesis [BR:
sbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Shew185_0683
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_16
nSTAND_NTPase5
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ABS06840
UniProt:
A6WJ51
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All DBs
Position
complement(828108..828962)
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AA seq
284 aa
AA seq
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MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGTLLEQLKGSNDLVAISVDVRNM
PEQDKVLVKQLASLPPDTELTSFFLNSSDKILLKRYSETRRLHPLSKSQVSLQEAIKLEG
KLLEPMSKLVDHYIDTSNLNIYDLSDQVRQILLGSVDKELVINFESFGFKHGMPTEADFM
FDVRFLPNPHWELALRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY
LTVAIGCTGGQHRSVYVAEQLAKRFSNGKHKVYARHRELNNAKA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggtcatagtgtcgggccgctcaggctcaggcaaatctgtcgccctaagggta
ctcgaagatctcggctattattgtgtcgataaccttcccttgcccttaatcggcactttg
cttgagcaactcaaaggcagtaacgatctcgtcgccatcagtgtcgacgtgcgtaacatg
cctgagcaggataaagtcttagtgaagcaactcgcgagcctgcctcctgatactgagtta
accagcttcttcctcaattccagcgataaaattctgcttaagcgttacagcgagacccgc
cgtttgcatcctttgtcgaagagccaagtctctttgcaagaagcgataaagctggaaggg
aaactgctcgagcctatgtcaaaactggtcgatcactacatagatacgtcgaatttgaat
atctatgatttaagcgatcaagtgagacaaattctgctcggcagcgtcgataaagagtta
gtgattaacttcgagtcctttggctttaagcacggtatgccaaccgaagccgactttatg
tttgatgtacgctttctgcctaacccacactgggaactggcgctgcgtccattgacaggc
ttagatgagcccgtggctgagttcttaaatcgtcaaccactcgtgaataagttcatctgg
caaatcgaaaatttactggaaacttggctgccacatctcgagcgtaacaatcgcagttat
ttaacggtagccattggctgcacaggtggacagcacagatcggtttacgtcgcagagcaa
ttggcaaaacgctttagtaacggtaaacataaagtttatgcccgtcatcgagagctgaat
aatgccaaagcttga
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