Shewanella baltica OS185: Shew185_0847
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Entry
Shew185_0847 CDS
T00571
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Shew185_0847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbm03019
]
Shew185_0847
Enzymes [BR:
sbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Shew185_0847
Messenger RNA biogenesis [BR:
sbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Shew185_0847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ABS07001
LinkDB
All DBs
Position
complement(1004689..1006230)
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AA seq
513 aa
AA seq
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MVYDSRQIFNQITDHISRCPIFRRISQFCKQLFEDAPKTTAPTQAQIEPTTPEQSSGALS
LELVPRDAHTISRKQISENALKVLYRLNKSGFKAYLVGGGVRDLLLGIEPKDFDVVTNAT
PEEIKKLFRNCRVVGRRFRLAHIVFGRDVIEVATFRGHHGESNEKVSKANAEGRLLRDNV
YGEIDEDAERRDFTVNALYYDISDYSIRSYGGGMTDLKAGTLRLIGDPETRYREDPVRML
RAVRFATKLNMGIETVTAAPIKQLAPLLKDIPAARMYEEVLKLFFAGKALANFELMQEYK
LFAPLFPQVAALLKDDPKGTTMKMVQAIMKSTDQRVNEDKPVTPSFFYAALLWYPLRQRA
EDIAVESGLTLYDAFFAAMGDVMEQQCQTISIPRRFSTPAKDIWQLQLRFDRSQGTRAFK
LMEHPKFRAAYDLLLLRGEVEAGNVAKSAAWWQQFVEADETERLAIARSGSKSPNRNRNA
TQRRRRPRAPNADGSAATSAPKTSGTPKAKAAE
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
ttggtatatgatagccgccagatttttaatcaaataacagatcatatttcgaggtgtccc
atttttcgccgtatcagccaattctgcaaacagctatttgaagacgcgcctaaaacgacc
gctccaactcaagctcagattgaaccgactacgccagaacaaagttccggtgcgttaagc
ttagagttagtgccgagagatgcccataccatctcgcgcaaacaaatcagcgaaaatgcc
cttaaggtattatacagactgaataaatcaggttttaaagcctatttagtcggcggcggt
gtacgcgatttactcttagggattgaaccgaaagatttcgacgttgtgaccaatgcgacg
ccggaagaaatcaaaaaactattccgcaactgccgagtcgtcggtcgtcgtttccgtctg
gcccatatcgttttcggccgcgatgttatcgaagtggcgacctttcgtggtcatcatggc
gaaagcaatgaaaaagtttccaaagccaatgccgaagggcgtttgctgcgcgataacgtt
tatggcgaaatcgacgaagatgcagagcgccgcgactttaccgtcaatgccctctattac
gatatcagcgattactcgatccgcagctacggcggcggtatgacagatctcaaagcgggc
acactaagattaattggcgatccagaaacccgttaccgtgaagatccggtgcgtatgtta
agggcggtgcgtttcgccactaaactcaacatgggtatcgaaaccgtcactgcggcgccg
attaaacaattagcgccactgctaaaagatattcctgctgcgcgtatgtacgaagaagtg
ctgaaactcttctttgcaggcaaagccttagccaacttcgaactgatgcaagaatacaag
ctattcgcgccgctatttccgcaagtggccgctctgctaaaagatgatcctaaaggcacg
accatgaaaatggtgcaagccatcatgaagagcacagatcaaagagttaacgaagataag
ccggtgacgccttcattcttctatgctgcgcttctctggtatccactgcgtcaacgcgcc
gaagatattgcagttgaaagtggcctgacgttatatgatgccttctttgctgctatgggc
gatgtgatggagcagcaatgccaaaccattagcattccacgccgttttagtacgccagca
aaagacatttggcagttacagttacgctttgaccgtagccaaggcactcgtgcttttaaa
ctaatggaacaccctaagtttagagccgcatacgatttgctattgctcaggggcgaagtc
gaggcgggtaatgtcgctaagagtgccgcttggtggcaacagtttgttgaagccgatgaa
actgaacgcttagccattgcgcgtagcggcagtaaatcgcccaatcgtaaccgtaatgcc
actcaacgtcgtcgccgtcctcgcgcaccgaatgcagatggttcagccgcgacgagcgca
cctaaaacaagtggcacgccaaaagcgaaagcggctgaataa
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