Shewanella baltica OS185: Shew185_1025
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Entry
Shew185_1025 CDS
T00571
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm00061
Fatty acid biosynthesis
sbm00071
Fatty acid degradation
sbm01100
Metabolic pathways
sbm01212
Fatty acid metabolism
sbm02024
Quorum sensing
sbm04146
Peroxisome
Module
sbm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Shew185_1025
00071 Fatty acid degradation
Shew185_1025
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Shew185_1025
09145 Cellular community - prokaryotes
02024 Quorum sensing
Shew185_1025
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbm01004
]
Shew185_1025
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbm04147
]
Shew185_1025
Enzymes [BR:
sbm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Shew185_1025
Lipid biosynthesis proteins [BR:
sbm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Shew185_1025
Exosome [BR:
sbm04147
]
Exosomal proteins
Exosomal proteins of breast milk
Shew185_1025
Exosomal proteins of breast cancer cells
Shew185_1025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABS07177
LinkDB
All DBs
Position
complement(1218572..1220173)
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AA seq
533 aa
AA seq
DB search
MAYDQDSQLKLDYSSLVDLIEKTSLRYGDKPAYACLGKTSSFNEIERDSRYFAAYLQNKT
TLKPGDRIAIQLPNITQFVIAAYGAIRAGLILVNTNPLYTERELIHQFNDSGAKALVVLS
DLLPTLAKVIDSTQIELVISTHPLDLIDPHVQPKTGLKNVEFCQILKQGADLPFSRFISN
LDDLSALQYTGGTTGLSKGAMLTHGNMLANAAQVKSRIASVITEGEDIFVAPLPIYHIYA
FMVNLVLYFECGGCSVLIPNPRDISGLIKTLAKYPFTGFAGLNTLFVALCHQPEFKALDF
SHLKITISGGTALTAAAANIWQQTTGNMISEGYGLSETSPVISLNAPGYQKLGTIGKPVI
GTEVKLLDENNLEVPLGTAGELAARGPQVMRGYWNNPQETANAMTPEGFFKTGDIAIATA
EGFHQIVDRKKDMIIVSGFNVYPNEVENVLASHPSVIECAVVGVKDEHSGEAVKAFIVLK
DDSQDHQQAKEAILTYCREQLTAYKLPKVIEFMTQLPKSTVGKILRRELKDKA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcatacgatcaagactctcaactcaaactagactactcatcactggtcgatctgatc
gagaaaaccagcctgcgttatggcgataaacccgcctatgcctgccttggtaaaaccagc
agttttaatgagatagaacgcgactctcgttactttgccgcctatttacaaaataagacc
acactcaaaccgggcgatcgcatcgccattcaattgcccaatatcacccaatttgtcatc
gcggcctacggcgcaatcagggctgggctaatccttgttaatacgaatcctttatatacc
gagcgcgagcttattcatcagttcaatgattctggtgctaaagcgctcgtggtgttatcc
gacctattgccgaccttggccaaagtcatcgacagtactcaaatagaactcgtcatctcc
acccatcctttagatttgatcgatccgcatgtgcagccaaaaacagggcttaagaatgtc
gagttttgtcagattttaaagcaaggggctgaccttccttttagccgatttatctcgaat
ctcgacgacctctcggcgttgcaatacacaggtggcacgacgggattatcgaaaggtgcc
atgttgacccacggcaatatgctcgccaatgcggcgcaggtaaaatcccgtatcgcgagc
gtgatcaccgaaggggaagatatctttgttgcgccattgccgatttaccatatttacgct
tttatggtgaacttagtgctgtatttcgagtgcggcggttgctcggtattaattccaaat
ccgcgtgatattagtggcttaattaagacactcgccaaataccccttcacgggatttgca
ggactcaataccctgtttgtcgccctatgccatcaacccgagtttaaggcgctggacttt
agccacttaaaaatcactatctctggcggcactgcactcactgccgcagcggcgaatatt
tggcaacagaccacaggcaatatgatcagcgaaggttatggattatctgaaacctcaccg
gtgatttcactcaatgcgcccggttatcaaaagcttggcactattggtaaacctgtgatt
ggcactgaagttaaactcttagatgaaaacaaccttgaagtgcccttaggtacagcggga
gaattagccgcgcgtggcccacaagtgatgcggggttattggaataatccgcaggaaacc
gccaacgctatgactccagaaggtttctttaaaaccggtgacattgccatagcaacagcg
gaaggtttccatcaaattgtggatcgcaaaaaggatatgatcatagtttcaggctttaac
gtttatcctaacgaggtggaaaacgtgctggcgagccatccaagtgtgatcgaatgcgcc
gtggtgggagtaaaagatgaacactcgggcgaagcggttaaagcctttatcgtgctcaag
gatgatagccaagatcatcaacaggctaaagaggccattctaacctattgccgcgagcaa
ttgactgcctataaattgccaaaagtcattgaatttatgacgcaattacctaagagtacc
gtaggtaaaattctgcgccgcgagcttaaagataaagcttag
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