Shewanella baltica OS185: Shew185_1235
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Entry
Shew185_1235 CDS
T00571
Name
(GenBank) transcriptional regulator, LysR family
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbm03000
]
Shew185_1235
Transcription factors [BR:
sbm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Shew185_1235
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
MarR
Motif
Other DBs
NCBI-ProteinID:
ABS07386
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All DBs
Position
1476869..1477804
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AA seq
311 aa
AA seq
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MRDDSHWMSMLHLNYNHLYYFWMIKKKGSVAKAAEALCLTPQTITGQIRALEDRLNGSLF
KRVGRTLEATELGELVFRYADKMFSLSYEMLDLLNYQKDDAMLFEVGIADALSKALVSRV
LLSVVPNDSSMHLACYEATHESLMARLREHKLDMILSDCAGESLKYPEILSKKLGECGVS
FFSADTYSADFPACLEQGQLLIPGRRTSLGQQLYRWFDEQNLKVSILGEFDDAAMMKAFG
YLKRGIFVTPSIYRQEVISHGMNLLGETTDVKEEYHVMFAERMIQHPAVKRLLDTDFSDL
FAGRDMQVQQC
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagggacgattcacactggatgagcatgctgcacttgaattacaaccacctgtattat
ttttggatgattaagaaaaagggctcggttgctaaggcggccgaagccctctgtttaacg
ccgcaaacgataactgggcaaattcgtgccctagaagacaggttgaatggcagtttattc
aagcgagtagggcggacactggaagccactgagttaggtgagttggtatttcgctacgca
gataagatgtttagtcttagctacgaaatgctcgatttacttaactatcaaaaagatgat
gcgatgcttttcgaagtgggtatagccgatgctttgtctaaagccttagttagccgtgtc
ttgttatccgtcgtccccaatgacagttctatgcatttagcttgctatgaggcgacccac
gaaagcctgatggcgcgtttgcgtgagcataaactggatatgatcctctccgattgtgct
ggtgaatcactgaagtatcccgaaatcttatctaaaaagttgggcgagtgtggtgtgagt
tttttctccgcagatacttatagcgctgatttccccgcctgtttagagcaaggccagcta
ttaatccccggccgcagaacctcacttggacagcagttatatcgctggtttgacgaacaa
aatcttaaagtcagtatcttgggtgagttcgacgatgcggccatgatgaaggcctttggt
taccttaaacgggggatttttgtcacgccgtcgatttatcgccaagaagtgatttcccat
gggatgaatttgctcggtgaaaccacggatgtgaaagaggaataccatgtgatgtttgcc
gaacgtatgatccaacatcctgcggtaaagcgcttgttggacacagatttcagcgatctc
tttgcgggacgcgatatgcaagtccaacaatgctaa
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