Shewanella baltica OS185: Shew185_1245
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Entry
Shew185_1245 CDS
T00571
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Shew185_1245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbm03019
]
Shew185_1245
03009 Ribosome biogenesis [BR:
sbm03009
]
Shew185_1245
03036 Chromosome and associated proteins [BR:
sbm03036
]
Shew185_1245
Enzymes [BR:
sbm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Shew185_1245
Messenger RNA biogenesis [BR:
sbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Shew185_1245
Ribosome biogenesis [BR:
sbm03009
]
Eukaryotic type
90S particles
RNase
Shew185_1245
Prokaryotic type
rRNA processing factors
Shew185_1245
Chromosome and associated proteins [BR:
sbm03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Shew185_1245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
ABS07396
UniProt:
A6WKQ7
LinkDB
All DBs
Position
1486156..1486836
Genome browser
AA seq
226 aa
AA seq
DB search
MEPIKNLPRLCRTLGYEFKNIELLTQALTHRSAANKHNERLEFLGDSILSIVISDALYHQ
FPKATEGDLSRMRATLVRGDTLTIIAQEFKLGDYLYLGPGELKSGGFRRESILADAVEAI
IGAVYLDSDLEVCRALLLKWYAERLAEIQPGISQKDAKTLLQEHLQGFKKPLPDYQVINI
EGDAHDQTFTVECRIEDLSQSVIGVASSRRKAEQIAAAQVLELLKK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgattaaaaatttgccacgtttgtgtcgtactttaggttatgagttcaagaat
attgagctgttgactcaagcgctgacccacagaagtgcggcaaataaacacaatgaacgc
ttagagtttttaggtgattcaattttatctattgtgatttctgatgccttatatcatcag
tttccgaaggcaaccgaaggcgatttaagccggatgcgcgctaccttagtgcgcggtgat
accttaacgatcatcgcccaagaatttaagctcggcgattatttatatcttggtcctggt
gaattaaaaagtggcggatttagacgcgagtcgattcttgccgatgcggttgaagccatt
attggcgccgtctaccttgattccgatctcgaagtttgccgtgcattactgctgaaatgg
tatgccgagcgtttggccgaaattcaacccgggatcagccagaaagacgcaaaaacctta
ctgcaagaacatttacaagggtttaaaaaaccgctgcctgattaccaagtaatcaacata
gaaggcgatgcccacgatcagacatttaccgttgaatgtcgtattgaagacttgagccaa
agcgtcattggtgtggcgagttcacgccgtaaagccgagcaaatcgcggccgctcaagta
ttggagttactaaagaaatga
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