Shewanella baltica OS185: Shew185_1407
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Entry
Shew185_1407 CDS
T00571
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
sbm
Shewanella baltica OS185
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
HTH_30
AAA_2
AAA_16
HTH_28
MCM
HTH_50
nSTAND3
Phage_CP76
HTH_Tnp_ISL3
HTH_7
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABS07557
LinkDB
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Position
1693255..1694625
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AA seq
456 aa
AA seq
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MARLTLFYHLQDVNAEQAIIELAGTADFNKLRSVDDLPWIEQLEANHIDVAIIELSSLSR
EDYLGLLDNTALSNIEFIFLSDGQPNPNLDQLMSNFACYHFRKPYDMTLISDIFADFAQY
LVSSPIRPRPFSSELDQYGLLVGSSAAMHKLYRTIRRVSATDSNVLIIGESGAGKELVAN
TIHLASPRLNEPFIAINCGALSPELVDSELFGHVKGAFTGANRDHKGVFEQAEGGTLFLD
EVTEMPIEHQVKLLRVLENSEYRPVGGAKVQHANVRIVAATNRDPIVAIEAGQFREDLYF
RLAQFPIRVPPLRERGDDILGLAQHFLAYRNVAEKQNKSLAEDSAQMIAAYPWPGNVREL
KHAIERAYILADQEILPSHLQLPQASEMGASADDQVVIPQGMRLEDLEKIAIYQALETTQ
GNKTDTAEQLGISVKTLYNKLSKYEQQVEAGEPTAE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctcgattgacacttttttatcacctgcaggatgtaaacgccgagcaagctatcatt
gaactcgccggcacagccgactttaataagctacgcagtgtcgatgatttaccttggata
gagcagcttgaggcgaaccacattgatgttgccatcattgagctgtctagccttagccgt
gaggattatcttgggctgctggacaatacggccttgtctaatatcgagtttatatttctc
tccgacggtcagccgaaccccaatcttgatcagttaatgtcgaattttgcctgttatcat
tttcgtaaaccctacgatatgacgttgatcagtgacatcttcgccgattttgcccagtat
ttagtctcatcaccaatccggcctcggcctttttccagcgagctagaccaatatggtttg
cttgtcggttcctctgcagctatgcacaagctgtatcgtacgatacgtcgcgtttctgcg
accgacagtaatgtgctgattattggtgagagtggcgcagggaaagagctcgttgccaat
accatacatcttgccagcccgagattgaacgagccttttattgcaattaactgcggtgca
ttaagccctgagttggtcgatagtgagctgtttggtcatgtcaaaggcgctttcactggt
gcgaatcgcgatcacaaaggcgtatttgagcaggcagaaggtggaaccttatttcttgat
gaagtcaccgaaatgccgattgagcatcaagtgaagttactcagagtgcttgaaaatagc
gaatatcgtcccgttggcggtgccaaagtgcagcatgccaatgtgcggattgtggcggca
actaatcgtgatcccatagtggcgattgaggcagggcaatttcgcgaagatttgtatttc
cgtttggcccagttccctatccgcgttccgccattaagggaacgtggcgatgatattctc
gggctagcgcagcattttcttgcctatcgtaatgtggccgaaaagcagaataaaagcctc
gctgaagacagtgcgcagatgattgcggcatatccttggccagggaatgtgcgtgaatta
aaacatgccattgagcgagcctatattttggcagatcaagagattttacccagtcactta
caactgccacaggcgagtgaaatgggggcatctgccgatgaccaagtggttattccgcag
ggcatgcgtttagaagacttagaaaaaatcgccatttatcaagcattagaaaccactcaa
ggcaataaaactgacacggccgagcaactggggatcagtgtaaaaaccctctacaacaag
ctcagcaagtacgagcaacaagtcgaagcgggtgagccgacggcggaatag
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