Shewanella baltica OS185: Shew185_1500
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Entry
Shew185_1500 CDS
T00571
Name
(GenBank) ABC transporter related
Organism
sbm
Shewanella baltica OS185
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA_14
NACHT
RNA_helicase
RsgA_GTPase
MMR_HSR1
DUF87
AAA_29
AAA_24
AAA_16
ATP-synt_ab
nSTAND3
MeaB
Roc
DUF5906
NPHP3_N
AAA_15
Septin
RRM_MARF1
NB-ARC
AAA_7
AAA_23
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABS07650
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Position
1812126..1813694
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AA seq
522 aa
AA seq
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MQFGAKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILCGDLDPSSGNVSLDVNERLGK
LSQNQFGYEEFNLIDTVIMGHRELWKVKQERDRIYSLPEMSEEDGITVANLEMDFAEMDG
YTAESRAGELLLGVGIGIDSHFGLMSEIAPGLKLRVLLAQALFSDPDVLLLDEPTNNLDI
DTIRWLQDMLNQRSSTMVIISHDRYFLNSVCTHMADLDYGELRVYPGNYDEYMQAATQAR
ERLLSDNAKKKAQISELQTFVARFSANASKAKQATSRARQIDKIKLDEVKASSRVNPFIR
FEQEKKLFRNALVIENLTKGYDTPLFEDLNLIVEVGERIAVLGENGVGKTTLLRTLIHDI
PQDAGTIQWSENANIGYYAQDHESDFANEMTLFEWMSQWRKPEDDDQSVRGILGRMLFGS
DDIKKSVKVLSGGEKGRMLFGKLIMQKANILVLDEPTNHMDMESIESLNNALEMYEGTLI
FVSHDRAFVSSLANRILEVTHTGVNDFRGTYDEFLASKGIEV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcggcgctaagccactgtttgaaaacatctcagttaaatttggcggtggtaac
cgttacggtcttatcggcgcgaatggctgtggtaaatcgaccttcatgaagatcctgtgt
ggtgatctagatcctagcagcggtaacgtctcgttagatgtgaatgagcgtctgggtaaa
ttaagccagaaccagttcggttatgaagaattcaacctgatcgatacagtgatcatgggc
caccgcgaactgtggaaggtaaagcaagagcgtgaccgtatttattctttacctgaaatg
agtgaagaagacggcattactgtagccaacctagagatggattttgctgagatggacggt
tataccgccgaatctcgcgccggtgaattgctgttaggtgtaggtatcggtatcgacagc
cattttggtttgatgtctgaaatcgctccgggtttaaaactgcgtgtactgttagcgcaa
gccctgttctctgatccagacgtgctgctgctcgacgaacctaccaacaacttggacatc
gacactatccgttggttacaagacatgttgaaccaacgtagcagtactatggttatcatt
tcgcatgatagatatttcttaaactcagtctgtacgcacatggctgacttagactacggc
gaattgcgcgtttacccaggtaactacgacgaatatatgcaagcggctacccaagctcgc
gagcgtttattgtctgataatgcgaagaaaaaagcccagatctctgagttgcaaaccttc
gtagcacgcttctcggctaacgcttctaaggcgaaacaagccacatcacgtgcccgtcaa
atcgacaagattaagttagatgaagtaaaagcctctagccgtgtgaaccccttcattcgt
ttcgagcaagagaagaaactgttccgtaatgccttagtgattgaaaatctgactaaaggc
tacgacacgccgctatttgaagacttaaacttgattgttgaagtgggcgagcgcattgcg
gtactgggtgaaaacggcgtcggtaaaacgaccctgttacgtaccctgatccacgacatc
ccgcaggatgccggtactatccaatggtctgaaaacgccaacattggttactatgcacag
gatcatgagtctgatttcgctaacgaaatgaccttgttcgagtggatgagccaatggcgc
aaaccagaagatgacgaccaatcggtacgtggcatcttaggccgtatgttgtttggttct
gacgacattaaaaagtcagtcaaagtgctgtctggtggtgagaaaggccgtatgttattc
ggcaagctcatcatgcaaaaagccaacattttagtgctcgacgaaccgaccaaccacatg
gatatggaatcgatcgaatcattaaacaacgcactggaaatgtacgaaggcaccttgatt
ttcgtgagtcatgaccgtgcattcgtatcgtcgctagctaaccgtatcctcgaagtgact
cacacaggtgtgaatgatttcagaggcacttacgatgagttccttgccagtaaaggcatc
gaagtctaa
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