Shewanella baltica OS185: Shew185_1573
Help
Entry
Shew185_1573 CDS
T00571
Name
(GenBank) transcriptional regulator, CdaR
KO
K02647
carbohydrate diacid regulator
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbm03000
]
Shew185_1573
Transcription factors [BR:
sbm03000
]
Prokaryotic type
Helix-turn-helix
Other families
Shew185_1573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
GAF
Motif
Other DBs
NCBI-ProteinID:
ABS07720
LinkDB
All DBs
Position
complement(1901351..1902592)
Genome browser
AA seq
413 aa
AA seq
DB search
MYLLDSAIAKQIVSRTMKIIGHNINVMNGQGVILGSGDPKRIGSTHEGALLAIAQNRNVE
ISQEVASGLHGVKPGINLPLHYQGQIIGVVGITGDPSELTHYGELLKMTAEMIVEQANLQ
DKLQWENRQREEFILQLIKAETDDDEQLHRWAKQLEIDISLPRVAAIIEISEKHTQKQHL
KTDANSSALYLAEASTQSADERSPRVSETLKQVLHLLQNPDRGNLIAMTSMSQLVILKPA
FLDGKQWDPELENQRIDKLLQRLPAQMDLNFKIALGHFFPEKGGIARSYQTAQETLALGK
QRNAESNKYLFEDYSLQVLLAGLKHDWRGQALASPYQQLAKADKNGQLRKTLAAYITHFG
DAQQCANALFIHRNTLRYRLDKIQQITQADIQSLHGLLSLYLGQLLDTSATPR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgcttgattctgccatcgctaaacaaattgtgagtcgtacaatgaaaatcatt
ggccacaatatcaatgtgatgaacggccaaggggtgattttaggctcaggcgatcctaaa
cgtattggttcaacccacgaaggcgcgctgctggccattgcccaaaatcgcaatgtggag
ataagtcaagaagtggcctctgggctacatggcgttaaacctggcatcaatttacccttg
cattatcaaggacaaatcataggtgttgtcggcattactggcgatccaagtgagcttacc
cattacggtgaattactcaaaatgaccgccgaaatgattgtcgaacaagccaacctgcag
gataaattgcagtgggagaatcgccagcgcgaagagtttattttgcagttgatcaaagct
gaaaccgacgatgatgagcagttgcaccgctgggcaaaacagttagaaattgatatcagc
ctgccacgggtcgcggccattattgagatcagcgagaaacacacccaaaaacaacattta
aagactgacgccaactcatcggccttgtatttagcagaggcatccactcagtccgccgat
gaacgcagccccagagtcagcgaaaccctcaagcaagtgctgcatctattgcaaaatccg
gatcgtggtaacttgattgccatgacctcaatgtcgcaattggtgatcctaaaacccgct
tttttagatggaaaacaatgggaccctgagcttgaaaaccagcgtatcgataaactgttg
cagcgcttacccgcccaaatggatttaaactttaaaattgccttaggccacttcttcccc
gaaaaaggcggtatcgcgcgctcctatcaaaccgcgcaggaaaccttagccctaggtaaa
caacgcaatgctgagagtaataaatacctgttcgaagattattccctgcaagtactacta
gcgggacttaaacatgactggcgtggtcaggcgctagcgtcaccctatcagcaactcgcc
aaggccgataaaaacggccagttacgcaaaaccttagccgcctatatcacccactttggt
gatgcgcagcaatgtgcgaatgcgctgtttatacaccgcaacacacttagatatcgccta
gataaaattcagcaaatcacccaagccgatatccaatccctgcatggattattgagtttg
tatcttggacaactgcttgatacttcggcaaccccaagataa
DBGET
integrated database retrieval system
