Shewanella baltica OS185: Shew185_1620
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Entry
Shew185_1620 CDS
T00571
Name
(GenBank) porin Gram-negative type
KO
K09476
outer membrane pore protein F
Organism
sbm
Shewanella baltica OS185
Pathway
sbm01501
beta-Lactam resistance
sbm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shew185_1620
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Shew185_1620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbm02000
]
Shew185_1620
01504 Antimicrobial resistance genes [BR:
sbm01504
]
Shew185_1620
Transporters [BR:
sbm02000
]
Other transporters
Pores ion channels [TC:
1
]
Shew185_1620
Antimicrobial resistance genes [BR:
sbm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, repression of porin OmpF [MD:
M00746
]
Shew185_1620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Motif
Other DBs
NCBI-ProteinID:
ABS07767
LinkDB
All DBs
Position
1960992..1962203
Genome browser
AA seq
403 aa
AA seq
DB search
MNKTLVATALAAIFLVPSVSAIEIYKDNKNAVEIGGFIDARVINTQGETEVVNGASRINF
GFNRELTDGWKAFAKLEWGVNPVGSSDIVYNNRFESVQEEFFYNRLGYAGLSHDTYGTLT
IGKQWGAWYDVVYNTNYGFVWDGNTAGVYTYNKDDGAVNGVGRGDKTVQYRNAFGDVSFA
VQAQLKNSSFYTCDTTDDITQAQCQANWESGDKAAQQVEYNYTYGGALTYKVTDMLTLTA
GVNRGEFDVSFGNGEQTTAVDLIYGAGITWGNFDNDGLYAAANVNRQENHDTDNIGRLIK
DAYGIESLVSYKFDNGLRPFISYNVLDAGKDYVIQPNFNADPNDEFKRQFLVVGLHFVWD
PNTVLYIEARKDYSDFTSADKDQEARMALSESDGVAIGIRYTL
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacgttagtagcaactgcgcttgcagcaatttttttagtaccatcagtctcg
gctatcgagatctataaagataataaaaatgccgtagaaatcggtggttttattgatgca
cgcgtgatcaacactcaaggggaaactgaggttgttaacggcgcatctcgcattaatttt
ggttttaatcgtgagttgactgacggttggaaagcctttgctaaattagagtggggcgta
aacccagttggtagcagcgatatcgtctataacaatcgcttcgaatctgttcaagaagag
ttcttctataaccgtttaggttacgcaggtctgtcccatgacacttatggaacactgact
atcggtaagcagtggggtgcttggtacgatgtcgtttacaacactaactacggttttgtg
tgggacggcaacactgcaggtgtttacacttataacaaagatgacggcgcggtaaacggc
gtgggtcgtggtgataaaacggtccagtatcgcaacgcctttggcgatgttagcttcgca
gttcaagcgcagttgaaaaacagcagcttctatacttgtgataccaccgatgatattact
caagctcagtgtcaagcgaactgggaaagtggtgataaagcggctcaacaagttgagtac
aactacacttatggtggcgcgctgacctataaagtcacagatatgttgactctaactgcg
ggtgttaaccgtggtgagtttgatgtgagttttggtaacggcgaacaaaccacagcggtt
gatcttatctacggtgcaggtatcacttggggtaacttcgataacgatggtttatatgct
gctgcaaacgttaacagacaagaaaaccatgacactgacaacattggtcgtttgatcaaa
gatgcctatggtattgaaagtttagtttcttacaagtttgacaatggcctacgtccattc
atttcttacaacgtgcttgatgccggtaaagattatgttattcagcctaacttcaatgct
gatcctaacgatgaattcaaacgtcagttcttagttgtcggtttacactttgtatgggac
ccaaatacagttctgtacatagaagcacgtaaagattacagcgatttcaccagcgcagat
aaagaccaagaagccagaatggcactttctgaatctgatggcgtagcaatcggtatccgt
tacacactctaa
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