Shewanella baltica OS185: Shew185_1639
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Entry
Shew185_1639 CDS
T00571
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbm03400
]
Shew185_1639
DNA repair and recombination proteins [BR:
sbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Shew185_1639
Archaeal homologous recombinant proteins
Shew185_1639
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
DUF3237
Motif
Other DBs
NCBI-ProteinID:
ABS07784
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All DBs
Position
1984129..1985274
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AA seq
381 aa
AA seq
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MKFIHTSDWHIGRQLHNQSLLDDQAFVLEQIIALADEHKVDAVIVAGDIYDRSIPPANAV
ALLDDVLNRLVQDLGLQVIMIAGNHDGHERLGFAAKQMATSGLHIIGPLSADIPPITLSS
TSGDVVFYPLPYAEPATVRQVFECEASSHEMAMDVLLAKVRQHDSQGLPKVVISHCFLDG
GSESESERPLSIGGADKISPKLFTEFDYVALGHLHGPQYKGAEHVRYSGSILKYSFSEQH
QHKSVTLVELGTQTPIDIRLLPLTSMRDVRILEGELDTLLAQGKTDAKREDYLMVRLLDK
HAILDAMGKLRAVYPNVLHLERTGLMAGQQQVALSRDHIKKGEMDMFCDFFSQVSGESLT
QAQQAVMDDLLTKLHNEERQA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatccacacctcggactggcacataggtcgtcagttacacaatcagtcatta
ctggatgatcaagcctttgtgctcgagcaaattattgccttagcagatgagcataaggtg
gatgctgtgattgtggcgggggatatttatgacagatcgattccgccagcaaacgcggtt
gcgctgttagatgatgtgctcaaccgcttagtacaagatttaggcctgcaagtgattatg
attgccggtaaccacgatggccacgagcgcttagggtttgcggcaaaacaaatggcgaca
agcgggttacatattattgggcctttgagtgctgacattccgcctattacattgtcgagt
acaagtggtgatgtggttttttatcccttgccttacgctgaacctgccacagtgcggcaa
gtgtttgagtgtgaggcatcgagccacgaaatggccatggatgtgttgctggcaaaagtg
cgtcagcacgatagccaaggcttacccaaagtggtgatcagccattgctttttggatggt
ggcagcgaatccgaatcagagcggccgctcagtattggtggcgccgataaaatatcgcca
aagctctttactgagtttgattatgtcgcccttgggcatttacacggaccgcaatacaaa
ggcgccgagcatgtgcgctactctggctcgattttgaagtattcctttagcgaacaacat
caacacaagtcggtgaccttagtcgaactgggcacgcaaacgccgattgatatccgttta
ttgccgttaacgtcgatgcgtgatgtccgcatcttagaaggggagttagacactttactc
gcccaaggtaaaacggatgcaaagcgtgaggattaccttatggtcaggctcctcgataaa
catgccattttagacgctatgggcaaacttagggccgtctaccctaatgtgctgcattta
gagcggacaggcctaatggcggggcagcaacaggtcgctttgagccgggatcatatcaaa
aaaggcgagatggacatgttctgtgactttttctcccaggtgtctggcgagtcattgacg
caggcacagcaagccgtgatggatgacctcctgactaagctacacaatgaggagcgccaa
gcatga
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