Shewanella baltica OS185: Shew185_1640
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Entry
Shew185_1640 CDS
T00571
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbm03400
]
Shew185_1640
DNA repair and recombination proteins [BR:
sbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Shew185_1640
Archaeal homologous recombinant proteins
Shew185_1640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
GTP_EFTU
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABS07785
LinkDB
All DBs
Position
1985271..1988327
Genome browser
AA seq
1018 aa
AA seq
DB search
MRPLSLSMSAFGPFASTQTLDFTALGTNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE
REGSQMRCDMADDSLLTEVTFSFQLGSNSYRIRRVPEQDRVKKSGDGSTVQKPEAQLFKI
DADGNESLLVASKVSEATAEIEALTGLDVEQFRQVMVLPQGKFRELLMADSKARELIFSQ
LFQTHIYRRIEDTLKNKAADISALVKDQRSRRDGILQSAGLASDDELSNELAKLTPELAL
AQSAKEQALQQQQLIIKASDAAQHLLAEFAQFDTLTQTAAALEAQQESIVAQTHKLNLAE
QAQRLAPMIEVFLAREQEAKAANLAFSHAQTALTQAKQAFDDAELKAQDLPVLEASLLEQ
EQAKQQLNALGPQLRELDRLNKTLEQEQAQLVKAKTQLQISKNELTAASQKRRELESALP
QLQANSDTRLTLQQAHQQQQQLLSTYQQWQQVAARVSSTKAKLANAKAQGQQLNAEHQQA
QVAHKALLITWHQGQAAILARQLQQDEPCPVCGSQIHPQPAQSQEPLPSDEALQLAQDAE
TTAQEVLSKARAEYRGLQTQLETLQQQAQDLAAQLGTAVDISQDQHAHTLSQYAFSLTQA
EQAHQDLQQLQQEIVLLHAQETHLQQKLEQGQTHDSALQSKVDLLQGQLAHMQQSVPPAL
ATLEALTAAITQNQQQISHIKQQIADVRALQQQTGQTFVAAKAALNGAENTAEAALAQQT
RAQQQLNQQLVAAGFTDQQALFAAMLDEDQLHALASEIEAYQQRSALTKAQCEQLALKLK
DKVPPDSIKLAAELESAQQALHAAEQVWQLLHTRTVLLTQTQTQLSIADTKAKALDDEYA
VIGTLADVANGKTGNKISLQRFVLSVLLDDVLLEASHRLHLMSKGRYRLLRKEDRAKGNK
ASGLELEVEDAYTSKVRPVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGF
GSLDQDSLELAIRTLMDLQSSGRMIGVISHVSEMKEQINTRIDINKTSHGSEMTIVLP
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgagaccccttagcctttcaatgtcagcctttggtccctttgcatcgactcagacactt
gattttacagcccttggaaccaatccgttatttctcatcaacggccccactggcgcgggt
aagacgaccttgctcgatggcatttgttttgcgctctatggcaaaaccacaggtaatgag
cgtgaaggcagccaaatgcgctgcgatatggccgacgatagtttactaacagaagtcact
ttcagttttcagctcggtagtaacagctatcgtattcgccgggtgccagagcaagacaga
gttaagaaaagcggtgacggctcgacagtgcaaaagcctgaagcgcagctctttaaaatt
gacgccgatggcaatgaaagcttattagttgccagtaaagtgtccgaggccaccgctgag
attgaagctttgactgggctcgatgtggagcagtttcgccaagtgatggtattacctcag
ggtaagtttcgcgaattattaatggcggactctaaagcgcgtgagctgatatttagtcag
ttatttcaaacgcatatttatcgccggattgaagatactttaaaaaataaggctgccgat
attagcgccttagtgaaagatcaacgcagccgccgcgatggtattttacaaagtgcgggc
ctagcatccgatgacgagctaagcaatgaattagccaagctcacacctgaacttgcgctc
gctcaaagtgccaaggaacaggcattacagcagcaacaattaatcattaaagccagcgat
gccgcccagcatctactggctgagtttgcgcagtttgataccttaactcaaacggctgca
gcgctcgaggcgcagcaagaaagcatagtcgcgcaaacccataagctgaacttagccgaa
caagcgcagcgtttagcgcctatgattgaggtgtttttggctcgtgaacaagaagcaaaa
gccgccaatctcgcttttagtcatgcgcaaacggcgttgactcaggccaagcaagccttt
gatgatgccgagctcaaagcgcaagacttacccgtattggaagcgtcgctactggaacag
gaacaagccaaacagcaactgaatgcgctagggccgcagcttagggaactggatagactc
aataaaaccctcgagcaagagcaagcgcagttagttaaagctaaaacacagcttcagatc
agtaaaaatgagttaaccgccgctagccaaaaacgccgtgaactggaatcggctttgcca
caattgcaggccaacagcgacactcgcctcacattgcaacaggcgcaccagcagcaacag
cagttattgtcgacttatcagcaatggcaacaagtggcggcaagggtatcgtcgacaaag
gcaaaacttgccaatgcgaaagcgcaagggcaacaactcaatgccgagcatcagcaagca
caggttgcgcataaagccttattaataacttggcaccaaggacaggcagccattttagcg
cggcaattacagcaagatgaaccttgtcccgtctgtggcagccaaatccatccgcagcca
gcacagagccaagagccgctcccaagtgatgaagcgctgcaattggcccaagacgctgaa
acgacggcccaagaagtcctgagcaaagccagagcggaataccgtggattacaaacacag
ttagaaaccttgcagcaacaagcgcaagatctcgcggcccaattgggcacagcggttgat
atttctcaagatcaacatgcgcataccttgtcgcaatatgcattttccctcacgcaagct
gagcaagctcatcaagatttgcagcagttacagcaagagattgtattgttgcacgcgcag
gaaacgcatctgcaacaaaagctggagcaaggacaaacacacgacagtgctctgcaatct
aaagtggatttattgcaggggcagttggcgcacatgcagcaaagcgtcccacctgcgctt
gcaacgcttgaggcattaaccgcagcaataacgcaaaaccagcaacagataagccatatt
aaacagcagattgctgacgtgagggcgcttcagcaacaaacagggcaaacctttgttgca
gctaaagctgcattgaatggtgccgaaaataccgctgaggcggcattagctcagcaaacg
cgcgcccagcagcaactcaatcagcaattagtcgcagcggggtttaccgaccaacaggcc
ttatttgcggccatgctggatgaagatcaactgcatgcattagccagcgagattgaggct
taccagcagcgcagtgctttgaccaaggcgcagtgcgagcagttagcgctgaagcttaaa
gataaagtgccacccgatagcattaagctcgctgccgagcttgagtcggcgcagcaagca
ttacacgcagcagagcaggtatggcagctacttcatactcgcacagtattgctcacacaa
actcaaacccagctcagtattgcagatacgaaagctaaggcgttagacgatgaatatgcg
gttatcggcacgcttgccgatgtggcgaatgggaaaacaggaaataagatcagtttgcag
cgttttgtgttaagcgtactgctcgacgatgtgttactcgaagcgagccataggctgcat
ctgatgagtaagggacgttatcgcttgctgcgtaaggaagatagagcaaagggcaacaag
gcgtctgggctcgagttagaagtggaagatgcctacacctcaaaagtgcgcccagtggca
accttaagcggcggcgaaagttttatggcggccttgtccatggcgttagggctatccgat
gtggtgcaagcttatgctggggggatcaaactcgacaccttatttatcgatgaaggcttt
ggcagtttagaccaagattcattggaattggcgattcgaaccttgatggatctgcagtct
tcgggccgcatgataggggtgatctcgcacgtttctgagatgaaagagcagataaatact
cgcatcgacatcaataaaacctcacatgggagcgaaatgacgatagttttgccttag
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