Shewanella baltica OS185: Shew185_1668
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Entry
Shew185_1668 CDS
T00571
Name
(GenBank) lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Shew185_1668
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbm02000
]
Shew185_1668
Enzymes [BR:
sbm01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Shew185_1668
Transporters [BR:
sbm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Shew185_1668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
RsgA_GTPase
DEAD
nSTAND3
ABC_ATPase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABS07813
LinkDB
All DBs
Position
2015191..2016999
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AA seq
602 aa
AA seq
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MTTSPKDEMWTVFKRLLGYIKQMKGMFMLSVAGLIIYGLVDAAFIAFIGPFIDKGFSGGA
PAAVTNGIALPTSEGFHANNDVLMMAPLVVIVMFSLRGFANFVSTYGISYMSARLIMDMR
QQVFEHYLSLPVSYMDKENTGNLISKVTFDTEQIARASGSALISIVRDSVTVFGMLALMF
YNSWKLSLCILVIGPIMGMVIAVVSRRFRKVSKQIQTAMGGVSATTEQMIKGHKNVLAFG
GQETEATRFAKVNDQNRHQNMKLAVAQAISQPLIMIIGSFALAFVLYAASLDSMKADLTA
GTFATILGAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTLPESDTGTYTVERAKGH
LRFDKVCFTYDSQDRRALEDVDFEVKPGQTLALVGRSGSGKSTIASLVTRFYTGLESGDI
LLDDVSIYDYSLKSLRNQVALVSQQVTLFNDTIANNIAYAYPGEATREQIIEAATLAYAM
EFIDQLPQGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDTESEKAIQ
KGLDNLRQNRTSVVIAHRLSTIESADQILVVDQGRIVERGTHQSLLELNGMYAKLYQMQF
GS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatctcctaaagacgaaatgtggacagttttcaaacgattactgggctatata
aaacagatgaaaggcatgtttatgctttcagttgcgggattaattatttatggtctcgtc
gatgccgcctttatcgctttcatcggcccctttatcgataagggtttttccggcggcgca
cccgctgcggtcaccaatggcatagcattgccaaccagtgaaggtttccacgcgaacaac
gacgtgctaatgatggcgccgcttgtggttatcgtcatgttttccctgcgtggttttgct
aactttgtctcgacctacggtatttcatacatgagtgcgcgtttgatcatggacatgcgt
cagcaagtgtttgagcattatctgagtctgcctgtcagttacatggacaaggaaaatacc
ggcaacttgatttcaaaagtcaccttcgatactgagcaaatcgccagagcatcgggtagc
gctttgatttctatcgtccgcgacagtgtgactgtgtttggcatgctggcgctgatgttc
tataactcttggaagttatccctgtgtatcttagtgatcggtcctattatgggcatggtc
attgctgtggtcagccgtcgtttccgtaaggtttctaagcaaattcaaaccgccatgggc
ggcgtgagtgccacgactgagcaaatgattaagggccataaaaacgtattggcctttggt
ggacaagaaaccgaagccacccgttttgctaaagtgaacgatcaaaaccgccatcaaaat
atgaagttagctgtggcgcaagccattagccagccgttgatcatgattatcggctcattc
gccttagcctttgtgctttatgcggcaagtttagacagcatgaaagccgatcttaccgcc
ggtaccttcgcgacaattcttggcgctatgatggccatgttgcaacccattaaaaactta
acccgagtgaacgctgaattccaacggggtattgcagcttgtaccacagtgtttgaatta
ctggatacgctgccagaatccgacaccggcacttataccgtcgagcgcgctaaggggcat
ttacgtttcgataaggtctgttttacctatgacagccaagaccgccgagcgctggaagat
gttgattttgaagttaaacccgggcaaaccttagcactagtcggccgttctggttcaggc
aagtcgactatcgccagtctagtgacccgtttttatacggggctcgaatctggcgatatt
ctgcttgatgatgtcagtatttacgattactcgctaaaatcgctgcgtaatcaagtggct
ctggtatcgcagcaggtgaccttattcaacgatacgattgctaataacatcgcctacgcc
tatcccggtgaagcgacgcgtgagcagattattgaagcggcgaccttggcctatgcgatg
gagtttattgatcagctgccccaaggccttgatacccaagtgggtgaaaatggcgtgtta
ttgtccggtggccaaagacaacgtatcgcgattgcgcgcgctatgttgcgtgatgcgcct
gtgttgatcctcgatgaagcgacctctgcgctggatactgagtcagaaaaagcgattcag
aaaggcttagacaacctcagacaaaaccgtacctcagtagtgatcgcccacaggttgtcg
actatcgagagtgccgatcaaattttagtggtggatcagggacgtatcgtcgagcgcggg
acgcaccaatcactattggaattaaatggcatgtacgccaaattgtaccaaatgcaattc
ggtagctag
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