Shewanella baltica OS185: Shew185_1891
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Entry
Shew185_1891 CDS
T00571
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm00061
Fatty acid biosynthesis
sbm00071
Fatty acid degradation
sbm01100
Metabolic pathways
sbm01212
Fatty acid metabolism
sbm02024
Quorum sensing
sbm04146
Peroxisome
Module
sbm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Shew185_1891
00071 Fatty acid degradation
Shew185_1891
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Shew185_1891
09145 Cellular community - prokaryotes
02024 Quorum sensing
Shew185_1891
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbm01004
]
Shew185_1891
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbm04147
]
Shew185_1891
Enzymes [BR:
sbm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Shew185_1891
Lipid biosynthesis proteins [BR:
sbm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Shew185_1891
Exosome [BR:
sbm04147
]
Exosomal proteins
Exosomal proteins of breast milk
Shew185_1891
Exosomal proteins of breast cancer cells
Shew185_1891
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
Motif
Other DBs
NCBI-ProteinID:
ABS08034
LinkDB
All DBs
Position
2255894..2257567
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AA seq
557 aa
AA seq
DB search
MDQPWINHLPKDVPAEINVEQYSSLVDMFETAVAKYEDQPAFINMGATLTYRKLEERSRA
FAAYLQNELKLEKGDRVALMMPNLLQYPIALFGVLRAGMVVVNVNPLYTPRELKHQLIDS
GAKAIVVVSNFARTLEEVVEQTPVESVIITSLGDQLSAPKRTLVNFVVKYIKKLVPKYDL
PHALSMRDTLSAGRRMQYIKPEVTNDDLAFLQYTGGTTGVSKGAMLTHGNIVANVLQADG
AYSPALNDGSEFVVTALPLYHIFALTVNCLLFLHKGSQNLLITNPRDIPGFVAELKKYPF
TALTGVNTLFNALVNSDDFSQLDFSRLKLSIGGGMAVQKAVADKWQAITKTRLLEGYGLT
EASPLLTCCPYNLDGYNGSIGFPAPSTLIQIRDDDGKVLAQGETGELFGKGPQVMKGYWQ
RPEETAKVIDTDGWLATGDIGYMDEKGFFYIVDRKKDMILVSGFNVFPNEVEEVVALHPK
VIEVAAVGVPNDASGELVKVFVVAKDKSLTAEDIIKHCRIHLTGYKVPKLVEFRDELPKT
NVGKILRRELRDEAKRA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtggatcagccttggattaatcatttgccaaaagatgtgcctgctgaaattaatgtggag
cagtactcatcgcttgttgatatgttcgaaacagcggtggctaagtatgaagaccaacct
gcatttatcaacatgggtgccacgctaacctatcgtaaattggaagaacgcagccgtgca
ttcgccgcgtatctacaaaatgaattaaagcttgaaaagggcgatcgtgtcgccttaatg
atgccaaatctgttgcaatacccgattgcactgtttggtgttttacgtgccggtatggtg
gtcgttaacgttaatccgctatataccccgcgcgaacttaaacatcagttgattgactcg
ggcgccaaagccatagttgtagtgtcaaacttcgcccgcaccttggaagaagttgtcgaa
caaacgcctgttgaaagcgtcattatcaccagtttaggtgaccaattaagtgcgccaaaa
cgcaccttagtgaactttgtggtgaagtacattaagaagctcgtccctaaatacgattta
ccgcacgccttatcgatgcgcgataccttatcagctggtcgtcgcatgcaatacatcaag
cctgaagtgactaacgacgatttagcgtttttgcagtatacaggtggcacaactggggtg
tctaaaggcgcgatgttgacccatggcaatattgtcgccaacgtattgcaggccgatggc
gcttattcacctgccttaaacgatggcagcgagtttgttgtaacggctttgccgctgtat
cacatcttcgcgttgacagttaattgcctgctgtttttgcacaaaggcagccagaactta
cttatcaccaatcctcgtgatatcccaggatttgtggccgagttgaaaaagtatcctttc
actgcattgactggggtaaacaccttgtttaacgcgttagtgaacagtgatgatttttcc
cagttggatttttcgcgcttaaaactctctatcggtggcggcatggcggtacaaaaagcc
gtggcggataaatggcaagctatcactaagacccgtttactcgaaggttatggtctgacc
gaagcctcacctttattaacctgttgtccatataatttagatggttacaacggttcaatt
ggtttccctgcaccttcgacacttattcaaatccgtgacgatgacggaaaggtattagcc
caaggcgaaaccggtgaactgtttggtaagggcccgcaagtgatgaaaggctattggcaa
cgtcctgaagaaactgccaaagtgattgacactgacggctggttagccacgggcgatatt
ggttacatggatgagaaagggttcttctatattgtcgatcgtaagaaagacatgatctta
gtttcaggctttaacgtattccccaatgaagtcgaagaagtggtcgcactgcatcctaaa
gtgattgaagtggctgctgttggtgtaccaaacgacgccagtggtgagttagtgaaggta
tttgtggtggcaaaagataaatctttaaccgctgaagacatcattaagcactgccgtatt
catttaacgggatataaagtaccgaagctggtagaatttagggacgagttacctaaaacc
aacgtgggtaagatcttgcgacgagagcttagagacgaagctaagcgcgcgtaa
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