Shewanella baltica OS185: Shew185_2010
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Entry
Shew185_2010 CDS
T00571
Name
(GenBank) MLTD_N domain protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbm01011
]
Shew185_2010
Enzymes [BR:
sbm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Shew185_2010
Peptidoglycan biosynthesis and degradation proteins [BR:
sbm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Shew185_2010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
ABS08153
LinkDB
All DBs
Position
complement(2396919..2398466)
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AA seq
515 aa
AA seq
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MRVSLYVVVGGFALLTGCQTLDNHGVNQTEVEAVTTENTVPEYYLATEAPSAQITDVWER
IRQGMQLPVPDQKLVNQYRDWYIKNPQHLEIISERAAPYMYLIVEELEKRHLPIEIALLP
IIESAFDPSASSASAASGLWQFTTPMASHFGLEMNWWYDGRRDVPASTTAALDMLEYLYD
KTNNNWLYAIAAYNSGESRVLNAIKRNEKKGLKTDFWSLDLPSETERYVPQLLALAEVIK
HADEYGITLAPISNNPSIEVVDIDSQIDLAMAAGLANMTTLELQKLNPGYNRWATSPLGP
HTLVLPIDKSEEFKKALAETETEDRISWLRYTIKSGDSIGKIAKQHHTTINAIRAANGMK
NNTIVAGKHLIIPVDAQDKQLYALSTQQQLPKKSHAATESTKIAYQVKSGDTLSEIAQAH
KVTVKQLSVWNKLGKSDKLQNGQQLVILAPKNLEQTAQIRTVSYKVKSGDSLARIASKFN
VTVAELLEWNSLAQSQYLQPGQVIKLVVDESKLSA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagagtatcactttatgttgttgtagggggatttgccctactcacaggttgtcagaca
ttagacaaccatggcgttaatcagacagaagttgaagccgtcacaaccgaaaatacagtc
ccagaatattacctcgcaactgaggctccgtcggcgcaaattaccgatgtgtgggagcga
atacgtcaaggtatgcaattaccggttccagatcaaaaattggtaaatcaatatcgcgat
tggtacatcaaaaatccgcagcatctagagatcatctcagagcgtgctgcaccttatatg
tacctgatcgtggaagagcttgaaaagcgtcatcttccgattgagatcgccctattacct
attatagaaagcgcctttgatccatcggcgtcttcagcaagtgcggcatcgggtttgtgg
caattcaccacgccaatggccagccatttcggtttagaaatgaactggtggtacgacggt
cgccgtgatgtacccgcttcaacgactgcggcgctcgacatgttggaatatctttacgat
aaaaccaataacaattggctttatgctattgcggcctataactcgggtgaatctcgggtg
ctcaatgcgattaaacgtaacgagaagaaaggcttaaaaactgacttttggtcattggat
ttacccagtgaaacagaacgctacgtaccgcaactgctggcgctggccgaagtcattaaa
cacgccgatgaatatggcatcactttagcgccaatcagcaacaatccttcaattgaagtg
gttgatattgatagccaaattgatttagccatggcggcaggtttggcaaacatgaccaca
cttgagctgcaaaagctcaaccctggttataaccgctgggccacttcgccactggggccg
cacaccttagtattgccgattgataaatcggaagaatttaagaaagcactcgccgaaaca
gaaaccgaagataggatcagttggctacgctacacgatcaaatcaggtgacagtattggc
aaaattgcgaagcagcaccacacgactataaatgcaattcgcgccgccaacggcatgaaa
aacaataccatagtcgcgggcaagcatttgattattcctgtcgatgcgcaagacaaacag
ctctatgccctgtcgactcagcaacaattgccgaagaaatcgcacgctgcgactgaatcg
acaaaaattgcctatcaggttaagtctggtgacacactttctgaaatcgcccaagcccat
aaagtgacagtgaaacaacttagcgtttggaacaaattaggtaagagtgacaagctacaa
aatggtcaacaactggtgatcttagcgccgaaaaatcttgagcaaactgcgcaaattcgc
actgtgagttataaggtcaaatcaggtgattcactcgcccgtatcgccagcaaatttaac
gtgactgtggcagaactattggagtggaatagcctagcgcaatcacagtatttgcaacca
gggcaagtgatcaaattagtggtcgatgaaagtaagttgagcgcataa
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