Shewanella baltica OS185: Shew185_2046
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Entry
Shew185_2046 CDS
T00571
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Shew185_2046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbm03400
]
Shew185_2046
Enzymes [BR:
sbm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Shew185_2046
DNA repair and recombination proteins [BR:
sbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Shew185_2046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
Viral_helicase1
UvrD_C_2
SH3_13
AAA_11
NAT10_TcmA_helicase
UvrD-helicase
AAA_22
SLFN-g3_helicase
TraI_hel_assoc_N
AAA_28
PhoH
UvrD_C
nSTAND3
NTPase_1
SRP54
NACHT
AAA_16
ResIII
DUF5076
Motif
Other DBs
NCBI-ProteinID:
ABS08188
LinkDB
All DBs
Position
complement(2447651..2449870)
Genome browser
AA seq
739 aa
AA seq
DB search
MMRSTQGLNAHSLSAAKWIEHGAIQLTAPLTELLKLWEQERLLTPLDRHFALEMSLLHPS
DSQQPLFMLLCALLSQQLSSQHSCLVLTHIVPLNPMAEQNSHCKITLSLEALIETLQTFD
AVGQAGSNKPLIFDNGRLYLQRYHQFETSVATALIRLSGSVSKHSEDASHQEQPQTAKLR
SLLDQLFPANLLAPHSLTTNVLTNSEGTQSTAPIDWQKVATATALGKKLSVITGGPGTGK
TTTVTKLLLLLQMESMQEIRLVAPTGKAAARLSESIKASKARLAKELSAHADVIDEARNR
NNQDFLTALGRIPEEASTLHRLLGVIPNSPHFRHHQGNPLRLDLLIVDEASMVDLPMMYK
LLSALPEHASLILLGDQDQLASVEAGAVLADICAGLKIPVDPNNLAQNNIASNNPALWQM
RYSKEQAERLSALTGFELTPYISDAPKLGDSLCMLMHSHRFKGDAGIGLLASAVNRADLQ
GILQVWQQGLAELNWLEHSMVVSQTQAKVSEPANNVGLNLLLEQACQQYGVYLSALNNHA
SNNDVSNSDVDTRPSTADIIESFNQYRILCAMRSGDYGVEGINQYVTQALANAKLIKPLQ
EFYLGRPIIIQSNDYNLGLFNGDIGLILQDEDKPERLMAHFIKADGSLLKVLPARLPSHE
TCYAMTVHKSQGSEFSRVALVLPPNPSLAQWQLLTKELIYTAITRAKVHFTCLGTQHVFE
RASSQATQRASGLADRLWG
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgctcaactcaagggctaaatgcacattcactctcagccgcgaaatggatagaa
catggcgcaatccagcttaccgcaccgctaacagagctgttgaaactgtgggagcaggaa
cgactgctcacgccactcgatcggcatttcgcactcgagatgagtctcttacatccaagc
gacagccaacaacccttgtttatgttgctatgtgcgctgttgagccagcaattatcttca
cagcacagctgcctagtgctcacccatatcgtgccgcttaatcccatggccgagcaaaat
agccattgtaaaatcaccttaagcctagaagcgctcatagagactttgcaaacctttgat
gccgtcggccaagcaggaagcaacaaaccacttatttttgataatggcagactctatcta
caacgttatcatcaatttgaaacctcagtggccactgctttaatccgcctatcaggcagc
gtatctaagcactctgaagacgctagccaccaagagcaacctcaaaccgctaagttgagg
tcgctgttagatcaactgttccctgccaatctgctcgcgccccattcactcactaccaat
gtactgactaacagtgaaggcacacaaagcacagcacccattgattggcaaaaggtcgcc
acagcaaccgcgctgggtaaaaaattgtcggtgatcactggcggcccaggtacgggcaaa
accactactgtgactaagcttttgttattgttacaaatggagtccatgcaggaaatccgt
ttagtcgcaccgacgggaaaagcggcggctcgcttaagcgaatcgatcaaagcctcgaaa
gcgcgtctggcaaaggaactcagcgcccatgctgatgttattgatgaagctcgtaataga
aacaaccaagattttttaacggcattggggcgtattccagaggaggcatcaaccttacac
agactgctcggggtgatcccaaattcgccgcactttcgccatcatcaaggtaatccgctt
aggctcgacttattgatcgtcgacgaagcctctatggtcgatttgcccatgatgtataaa
ttgctcagcgcactgcccgagcacgccagtttgattttactcggcgatcaagaccaactc
gcctcggttgaggctggcgctgtgctcgccgatatttgtgcaggtcttaaaataccagta
gatcccaataaccttgcgcaaaacaacatagcatctaacaatcctgctctgtggcaaatg
cgctattccaaggagcaagccgagcgcctgagcgctctaacgggttttgagttaacgccc
tatatcagcgatgcccctaaacttggcgatagcttgtgtatgctgatgcacagccacaga
tttaaaggcgatgcggggattgggctgcttgctagcgccgtcaatcgcgcggatcttcaa
ggcatattgcaagtatggcaacagggccttgctgaattgaactggttagaacacagtatg
gtcgtaagccaaacccaagccaaagtgagcgagccggctaataatgtgggactcaattta
ctgctagagcaagcctgtcagcaatatggcgtttatctcagcgccttgaataaccatgca
agtaacaatgatgtaagtaatagtgatgtagacacacgtccaagcacggctgacatcata
gaaagctttaaccagtaccgcattttatgcgccatgcgctcgggcgattatggggtcgaa
ggcattaatcagtatgtgactcaagcactggccaatgccaagctgattaaaccgctacag
gagttttatctgggtcggccgattatcatccaaagcaatgactataacttaggcctgttt
aacggtgatatcggattgattttgcaggatgaagataaacccgaacgtttaatggcgcac
ttcatcaaggccgatggcagcctgttaaaagtcttgccagcacgtttgcccagccatgaa
acctgttacgccatgacagtccacaaaagccaaggcagcgagtttagccgtgtagcctta
gtgctgccacctaaccccagcctagcgcagtggcaactgctgaccaaagagttaatctac
accgccatcacccgcgctaaagtgcattttacctgcttaggcacccaacacgtattcgag
cgggccagcagccaagcgactcagcgtgcatcgggtcttgcagacaggctttggggttaa
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