Shewanella baltica OS185: Shew185_2323
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Entry
Shew185_2323 CDS
T00571
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm00730
Thiamine metabolism
sbm01100
Metabolic pathways
sbm01240
Biosynthesis of cofactors
Module
sbm_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Shew185_2323
Enzymes [BR:
sbm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Shew185_2323
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ABS08461
LinkDB
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Position
complement(2772314..2774437)
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AA seq
707 aa
AA seq
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MSSSNQNPAVAANAIEITAPESTIPNKSTVPNKSAESSQSIVPKAPSRRETRAQAQAFID
TLAPLQHPNSQKIYLEGSSADIRVGMRQILQTDTLVGGTDDAPIMEKNPPIRVYDCAGPY
SDPEADINVRLGLGKLRQNWILARNDTEQLPCATSDFTQQRLADDGLDHLRFEVGSSAIV
RPRRALQGKRVSQLHYARQGIITPEMEYVAIRENMALAQVQDEILNRKAKGEAFGALVGE
PITAEFVRAEVARGRAIIPLNINHPEAEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKL
VWSTRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKVNGVAEDLTWEVFR
DTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLSHHKENFLYSHF
REICELCVAYDVSLSLGDGMRPGSIADANDAAQFAELETLGELVKIAWEYDVQTIIEGPG
HIPMQLIKENMDKQLAHCDEAPFYTLGPQITDIAPGYDHFTSGIGAAMIAWYGCAMLCYV
TPKEHLGLPNKQDVKQGLIAYKIAAHAADVAKGHPSAQIRDNALAKARFEFRWEDQYNLG
LDPETARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQDVRAYAAGLEAAQAKAEQVEA
AAQAMQVTVKTPQELEAAMALKSAEFAASGAEIYHVKDKLVAEAEEA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtccagttcaaaccaaaacccagctgtagctgccaatgcgatagaaatcacagcgcca
gaatcgacaatccctaataaatcgacagtgcctaataaatcggctgagtctagtcaatca
atcgtgcctaaggcgccgagtcgccgcgaaacccgcgcgcaggcccaagcctttatcgat
acgttagcgccactgcaacatcctaattcacaaaagatttatctcgaaggttccagtgcc
gatattcgcgttggcatgcggcaaattctgcagactgacacgcttgtcggcggtacagat
gatgcgcccatcatggaaaaaaatccgccaattcgcgtgtacgattgcgccggaccttat
tccgatcctgaggccgacatcaatgtgcgtctaggccttggtaaattaagacaaaactgg
attctagcccgcaacgatacagagcaattaccctgcgcgacctcagattttacccaacaa
agactcgctgacgacggtttagaccatctgcgttttgaggtgggctcgagtgccattgtc
cgcccacgcagagcgctgcagggcaaacgagttagtcaattacactatgcccgtcaaggg
attatcacgcccgaaatggaatatgtggcgatccgcgagaacatggcacttgcgcaagta
caggatgaaatcctcaatcgtaaagccaagggcgaagcttttggtgccttagtcggcgaa
ccgattaccgccgaatttgtccgcgccgaagttgcccgtggccgcgcgattattccgctg
aatattaaccatcccgaagccgaacctatgattatcgggcgtaattttctggtgaaagtg
aacgccaatatcggtaactcggcggtgacgtcttccatcgaggaagaagtggaaaagctt
gtctggtcaacccgttggggggcagatactgtcatggatttatccacgggtcgttatatt
cacgaaacccgcgagtggatcatccgcaactcaccagtgcccatcggcacagtgccgatt
tatcaagcgctggagaaagtgaacggcgtggcagaggatttaacgtgggaagtgttccgc
gataccttgattgaacaagctgagcaaggtgttgattactttactattcatgctggtgtg
ctgctgcgttatgtgccgatgacggctaaacgtgttactgggatcgtttctcgcggcggt
tcaattatggccaaatggtgcctgagtcatcacaaggaaaacttcctctacagccatttt
cgtgagatctgtgagctttgcgtcgcctacgatgtatccctgtctttaggtgatggtatg
cgtcccggatcgattgccgacgctaatgatgctgcccagtttgcagagcttgaaacctta
ggtgagctagtcaaaatcgcgtgggaatacgacgtacaaaccattatcgaagggccggga
catatcccgatgcagctcattaaagagaacatggacaagcagttagctcactgcgatgag
gcgccgttttacacgcttggcccgcaaatcactgatatcgcacctgggtatgatcatttc
acctccggcataggcgcggccatgattgcttggtacggctgcgctatgttgtgttatgtc
acgccaaaagaacacttaggattaccgaataaacaagatgttaagcaaggtttgattgct
tataagattgccgcccacgccgccgatgtggcgaaaggtcatccgagtgcgcaaattcgt
gataatgcgctggcaaaggcgcggttcgaattccgctgggaagatcaatataacttagga
ctcgatcctgaaaccgcacgtgcttatcacgatgaatctttaccgcaggaatccgctaaa
gtcgcgcatttttgctctatgtgcggccctaaattttgttcgatgaaaatcacccaagat
gtgcgcgcctatgccgctggcttagaggcggcacaagcgaaggcggagcaagttgaagcg
gctgcccaagccatgcaagtcacagtcaagacgccgcaggagttggaagcggcaatggcg
ctaaaatcggcagagtttgctgcttcgggcgccgagatctatcacgtgaaagacaagctt
gtcgccgaagctgaggaagcctaa
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