Shewanella baltica OS185: Shew185_2510
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Entry
Shew185_2510 CDS
T00571
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm00020
Citrate cycle (TCA cycle)
sbm00190
Oxidative phosphorylation
sbm00650
Butanoate metabolism
sbm00720
Other carbon fixation pathways
sbm01100
Metabolic pathways
sbm01110
Biosynthesis of secondary metabolites
sbm01120
Microbial metabolism in diverse environments
sbm01200
Carbon metabolism
Module
sbm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sbm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sbm_M00149
Succinate dehydrogenase, prokaryotes
sbm_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Shew185_2510
00650 Butanoate metabolism
Shew185_2510
09102 Energy metabolism
00190 Oxidative phosphorylation
Shew185_2510
00720 Other carbon fixation pathways
Shew185_2510
Enzymes [BR:
sbm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Shew185_2510
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
GIDA
Pyr_redox_2
FAD_binding_3
FAD_oxidored
Thi4
Motif
Other DBs
NCBI-ProteinID:
ABS08647
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Position
complement(2997905..2999671)
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AA seq
588 aa
AA seq
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MSIPVREFDAVVIGAGGAGMRAALQISKEGKSCALLSKVFPTRSHTVSAQGGITVALGNA
HEDHWEQHMYDTVKGSDFIGDQEAIEFMCKTGPEAVIELEQMGLPFSRFENGTIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHCLYQQNVKHKTQVFSEWYALDLVKNDDGAVVGC
TAIEIETGDIVYFKAKATILATGGAGRIYASTTNAHINTGDGVGMAMRAGVQMQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIREG
RGLDGPLGPHCLLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVLPTCHYMMGGL
PTKVSGQVIRKNEDGTEQDVIGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGQHLG
KALDETDDPKDASDADIQASLARLNRWESNKDGEDPAQIRKDLQLCMQLNFSVFRRGDAM
AEGLEQLKVIRERLENAKLSDNSREFNTQRIECLELDNLMATAIATAYAANFRTESRGAH
SREDYLERDDENWLCHSLFDPVTETMDRRAVNMAPKLREAFPPKKRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattccagtacgcgaatttgatgctgtagtgatcggtgccggtggcgctggtatg
cgtgcagcgctgcagatttccaaagaaggtaaaagctgtgcgcttttatcaaaagtattt
ccaactcgttctcataccgtatctgcgcagggtggtatcactgttgcgttaggtaacgcc
catgaagatcattgggaacagcacatgtacgataccgtgaaaggttccgattttatcggt
gaccaagaagcgattgaattcatgtgtaaaaccggtcctgaagccgttattgaacttgag
caaatgggtttgcctttttctcgtttcgaaaatggcacgatttaccaacgtccgtttggt
ggtcaatctaagaactttggtggcgagcaggctgcacgtactgcggcagctgccgaccgt
actggtcatgctttgctgcactgtttataccaacaaaacgtgaagcataagacgcaagtc
ttctcagaatggtatgcattagatctcgttaaaaacgatgatggcgctgttgtgggttgt
actgcgattgaaattgaaacaggcgatatcgtttatttcaaagccaaagcaacgattcta
gcgaccggtggtgcagggcgtatttacgcttctactactaacgcgcatatcaacaccggt
gacggtgtcggtatggcaatgcgtgctggcgtgcaaatgcaagacatggaaatgtggcaa
ttccacccaactggcatcgccggcgcgggtgtacttgtgactgaaggttgtcgtggtgaa
ggcggttatctgctgaacaaagacggcgagcgcttcatggagcgttatgcccctaacgcg
aaagatttggcatcacgcgacgtggtagcacgttctatgatgactgaaatccgcgaaggt
cgtggtttagacggtccattaggtccacactgtttactcaagcttgatcacttaggtaaa
gaaacattagaagcacgtttaccaggcgtgtgtgaattgtctcgtacctttgcccatatc
gatccggccgatggtccaatcccagtattaccaacctgtcactacatgatgggcggtctg
ccaactaaggtcagtggtcaagttattcgtaagaatgaagacggcactgaacaagatgtt
atcggtctgttcgctgtgggtgagattgcctgtgtatctgttcacggtgcaaaccgctta
ggtggtaactcattgctcgacttagtggtctttggccgcgcagcgggtcagcatttaggt
aaagctttggatgagactgacgatccaaaagacgcaagcgatgcggatattcaagcatct
ctggcccgtctgaatcgttgggaaagcaacaaagatggcgaagacccagcgcaaatccgt
aaggatctgcaactgtgtatgcaattaaacttctctgtattccgtcgtggcgatgctatg
gctgaaggtttagagcagttgaaagtgatccgcgaacgtcttgaaaatgctaaattgtct
gataactctcgtgaattcaacactcaacgtattgaatgcttagagttagataacttaatg
gcaacggcgattgcaacggcttatgcggctaacttccgtactgaaagccgcggtgctcac
tcacgtgaagattatttagagcgtgatgatgagaactggttatgccacagcttatttgac
cctgtgactgaaacgatggaccgtcgtgcagtgaacatggcacctaagttacgtgaagca
ttcccgccgaagaaacgtacctactag
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