Shewanella baltica OS185: Shew185_2780
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Entry
Shew185_2780 CDS
T00571
Name
(GenBank) fatty acid oxidation complex, alpha subunit FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm00071
Fatty acid degradation
sbm00280
Valine, leucine and isoleucine degradation
sbm00310
Lysine degradation
sbm00362
Benzoate degradation
sbm00380
Tryptophan metabolism
sbm00410
beta-Alanine metabolism
sbm00640
Propanoate metabolism
sbm00650
Butanoate metabolism
sbm00907
Pinene, camphor and geraniol degradation
sbm00930
Caprolactam degradation
sbm01100
Metabolic pathways
sbm01110
Biosynthesis of secondary metabolites
sbm01120
Microbial metabolism in diverse environments
sbm01200
Carbon metabolism
sbm01212
Fatty acid metabolism
Module
sbm_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Shew185_2780
00650 Butanoate metabolism
Shew185_2780
09103 Lipid metabolism
00071 Fatty acid degradation
Shew185_2780
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Shew185_2780
00310 Lysine degradation
Shew185_2780
00380 Tryptophan metabolism
Shew185_2780
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Shew185_2780
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Shew185_2780
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Shew185_2780
00930 Caprolactam degradation
Shew185_2780
Enzymes [BR:
sbm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Shew185_2780
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Shew185_2780
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Shew185_2780
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LSDAT_euk
LEM
Motif
Other DBs
NCBI-ProteinID:
ABS08914
UniProt:
A6WQ25
LinkDB
All DBs
Position
complement(3331384..3333504)
Genome browser
AA seq
706 aa
AA seq
DB search
MEKTFNLTRRDDGIAILTMDVPGETMNTLKAQFGPEISEILAEIKSDSSIRGLVLISGKK
DSFVAGADISMLDACKTAGDAKALSQQGHVVFNELEALTIPVVAAIHGACLGGGLELALA
CHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKKIRPKQALKM
GLVNDVVPQTILLQTAVEMALAGKRAPKPVKKSLVNQVLEGTSFGRNIIFDQATKQVEKK
TQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKESEALRSIFFATTEMKKET
GAEGASPRKVKKAVILGGGLMGGGIASVTTTKAKIPVRVKDISEKGLSNALAYAYKLLDK
GVKRRHMTPAARDNLMALMTTTTEYKGVKDADIVVEAVFEDLALKHQMVKDIERECGEHT
IFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMPLVEVIAHAKTSPETIATTVAFAR
KQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHLDKALVKFGFPVGPITLLDE
VGIDVGAKISPILEKELGERFKAPAAFDKLLSDDRKGRKNGKGFYQYGASSKKAKAVDES
VYGVLGIKPGTNKDAKAVAERCVVQMLNEAVRCLEDGIIASPRDGDIGAIFGIGFPPFLG
GPFHYIDTLGAANLVKILESYQSQFGNRFEPCERLKTMAQENAHFF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacctttaatttaacccgccgcgacgacggcattgctattttgactatggat
gttcctggcgaaaccatgaacaccctaaaagcgcagtttggccctgaaatcagtgagatt
ctggccgagatcaaaagtgattcgagcattcgcggtttagtgctgatctcaggcaaaaaa
gattcttttgttgcgggcgcagatatttctatgctcgatgcctgtaaaacggcgggcgat
gccaaagccttatcccagcaaggccatgtggtttttaatgagctagaagccttaacgatt
cctgtggttgccgcaattcatggtgcctgtttaggcggtgggttagagttagccttagct
tgtcatcaaagggtatgtagcgacgatggcaagactatgctcggcgttccggaagtccaa
cttggcttattgccaggcggcggcgggactcaacgtttgcctcgtttagtcggcattacc
accgccttagatatgatgctaaccggtaaaaaaattcgtcctaagcaagctttgaaaatg
ggcttagtgaatgatgttgtgccgcagacaattttgctacaaaccgcagttgagatggcg
cttgcgggtaaacgtgcaccaaaaccagttaaaaagtcactcgttaatcaagtgcttgaa
ggcacgagtttcggccgtaacattattttcgatcaagcgactaagcaggtcgaaaagaaa
acccaaggtaattatcctgcgcctgccaagatcattgactgcgtgcgtcaaggaattgct
aagggcatgcaaaagggtttagaagtcgaagccagtcattttgccgaattagtggtatcg
aaagaatctgaagcgctgcgcagtattttcttcgcgaccacagaaatgaagaaagaaact
ggcgctgaaggtgcgagcccgcgtaaagtgaaaaaagcggtgatcttaggtggcggttta
atgggcggtggtatcgcatctgtcacaacgaccaaggccaaaatccccgttcgtgtcaaa
gacatcagcgaaaaaggtttaagcaatgcattagcttacgcctacaagctgttggataaa
ggggttaagcgccgtcatatgacgcctgctgctcgtgacaacttaatggcactgatgact
acaacgactgaatataaaggcgttaaagatgccgacatcgttgtggaagcggtatttgaa
gacttagcgcttaagcatcaaatggtgaaagacattgagcgtgagtgtggtgagcacact
atttttgcgtcaaacacctcatctttgccgattagccaaatcgccgaggcggcgacacgt
ccagagaacgtgattggtctgcattatttctcaccagtagaaaaaatgccgctggtggaa
gtgattgcccatgccaaaacgtcgccagaaaccattgcgaccacggtcgcatttgcccgt
aagcaaggtaaaacaccgatagtggtacaagacggcgcgggtttctacgtgaaccgtatt
cttgcgctctacatgaacgaggccgcgcaattattacttgaaggccaaagtgttgaacat
ctggataaagccttagtgaagtttggtttccctgtgggccccattactttactcgacgaa
gtgggtatcgacgtgggcgctaagatttcaccaatcctcgaaaaagaattgggtgaacgt
tttaaagcgccagcggcttttgacaagcttttgagtgacgatcgtaaaggccgtaaaaat
ggtaaaggtttctatcaatacggcgcatcgagcaagaaagctaaagctgtcgatgagagt
gtttatggcgtgttaggtattaagccaggcaccaataaagacgcaaaagcggttgccgag
cgttgtgtcgtacaaatgctcaacgaagcggtgcgttgtttagaagatggtattatcgca
tcaccaagagatggtgatattggcgccattttcggtattggcttcccaccattcctcggt
ggaccattccactatattgacactttgggcgccgcgaacttagtgaagatccttgaaagt
tatcaaagtcaattcggtaacagattcgaaccttgtgagcgcttaaaaaccatggctcaa
gaaaacgcgcactttttctaa
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