Shewanella baltica OS185: Shew185_2826
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Entry
Shew185_2826 CDS
T00571
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
sbm
Shewanella baltica OS185
Pathway
sbm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shew185_2826
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbm02000
]
Shew185_2826
Transporters [BR:
sbm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Shew185_2826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
P5CR_dimer
Motif
Other DBs
NCBI-ProteinID:
ABS08960
LinkDB
All DBs
Position
3387753..3389150
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AA seq
465 aa
AA seq
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MAIATLFTALLVCMFLGMPIAIALGFSSMLTILFFSNDSLASVALKLYESSSEHYTLLAI
PFFILSSAFLSTGGVARRIIDFAMDSIGHVRGGLAMASVMACMLFAAVSGSSPATVAAIG
SIVIVGMVKAGYPEKFAAGVITTSGTLGILIPPSIVMLVYAAATEVSAARMFMAGLIPGL
MMGFILMIVIYIVARFKNLPSRPFPGFKQLGISSAKALGGLALILIVLGSIYGGVASPTE
ASAVACMYAYFIAVFGYRDIGPLKEVAWRNQGESLPKAAARNLGHMFLGLIKTPIDKDIR
NVVRDGAKVSIMLLFIIANAMLFAHVLTTERIPHIIAEHIVNMGLPAWGFLIIVNLLLLA
AGNFMEPSAIVLIMAPILFPIATHLGIDPIHLGIIMVVNMEIGMLTPPVGLNLFVTAGIT
GKSIGWVIQSVLPWLLLMLAFLTLITYVPQISLFLPEWLDSMRGY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgcaaccctatttaccgccctattagtgtgtatgtttctcggtatgcctatc
gctatcgcgttaggtttttccagcatgctcaccattttgtttttctcgaatgactcctta
gcctcagtggcactcaaactgtatgagtcttcatcggagcattacaccctactcgctatc
cccttctttattctgtcatccgccttcctctcaaccggtggcgtcgcgagacggattatc
gattttgccatggacagtattggacatgtccgtggtggattagcgatggcatctgttatg
gcctgtatgctgtttgcggcggtttcaggctcatcacccgcaaccgtagcggcgattggt
tcaatcgtgattgtgggcatggttaaagcgggttatcccgagaagtttgcggcgggggtt
atcacgacctcaggcacacttggtattttgatcccaccgtccattgtgatgttggtgtat
gcggcagcgaccgaagtgtccgcagcaagaatgtttatggcaggtttaatcccaggctta
atgatgggattcatactgatgatcgttatctacatcgtcgcccgctttaagaacctgcct
tcgcgtccttttccaggctttaaacaactagggatttcaagcgctaaagctttgggtgga
ttagcactcatccttatcgtactcggctctatctatggcggcgttgcgagcccgactgaa
gcttcggctgtggcttgtatgtatgcgtactttattgcggtatttggttaccgtgacatt
ggaccattaaaagaggtggcttggcgcaatcaaggtgaaagcttacctaaagccgccgca
cgtaacttaggtcacatgttcctagggctaattaaaacgcctatcgacaaagacatacgt
aacgtagtgcgtgatggtgctaaggtcagtatcatgttgctgtttatcatagctaacgct
atgttgttcgcgcatgtattaaccactgagcgtattccacatattatcgctgagcatatc
gttaacatgggtttacccgcttggggcttcctgatcatcgttaacttactgctgcttgct
gctggtaactttatggagccatcggcaattgtactgattatggcgccgatcctcttccct
atcgcgactcacttaggcatagatcctattcacttaggtatcatcatggtggtaaacatg
gagataggtatgctcacgccgccggtggggctcaacctctttgttaccgcggggatcacg
ggtaagagtattggctgggtcattcaatcggttctgccttggttactgctgatgttagcc
ttcttaaccttgatcacttacgtgccacagatttcgctcttcttaccagaatggttggat
tcgatgcgtggttattaa
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