Shewanella baltica OS185: Shew185_3132
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Entry
Shew185_3132 CDS
T00571
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbm03016
]
Shew185_3132
Enzymes [BR:
sbm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Shew185_3132
Transfer RNA biogenesis [BR:
sbm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Shew185_3132
Prokaryotic type
Shew185_3132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ABS09263
LinkDB
All DBs
Position
complement(3735492..3736625)
Genome browser
AA seq
377 aa
AA seq
DB search
MSELHYLYGKPLGTADLRTQNSDFIVKEILPFSPTGEGEHHMLHVRKEGLNTVQVAEMIA
KFAKVHPKEVTYAGQKDKNAITEQWFGVRIPGKETPLWKELNSERLTILSSSRHSKKLRI
GALVGNRFILTLRNVTQVEDIISRIEKVAQVGVPNYFGEQRFGHDGKNLVFGRQMMAGKK
VKDRNKRSMYLSAVRSNLFNTVVSYRLANHGTKPLAGDCVMLAGSKSFFVTPEWDLIVLK
RLIEKDIQLSAPLWGRGMMLPQGEAAAVETLAMSELADDCYGLEHAGLEQERRPLLLEPQ
ALKYEQTADGLVLEFVLPAGSFATSLLRELVNYQDVKEQQWQATLVQEPAPETTDANVAA
DTIEIKTEAAPNIEAES
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattacattatctgtatggcaagcctttaggtacagcagatctaagaacccaa
aatagcgattttatcgtgaaagagattttgccttttagcccaacgggtgaaggtgaacat
cacatgctgcatgtacgcaaagaagggctaaatacagtacaagtcgctgaaatgatagct
aagttcgctaaggtgcatccaaaggaagtgacctacgctgggcaaaaagataaaaatgcc
atcacagaacaatggttcggtgtgcgtattccgggtaaagagacaccgctttggaaggag
ctcaatagcgaacgtttgaccatattgtcgagcagccgccacagcaaaaaactgcgaatt
ggcgccttagtcggtaaccgttttattcttaccctgagaaatgtcacccaagtcgaagac
attatcagccgtatcgaaaaggtcgctcaagtgggcgtgcccaattactttggtgagcaa
cgctttggtcacgatggtaaaaacttagtttttggtcgccaaatgatggcgggtaaaaaa
gtcaaagatagaaataagcgcagcatgtatttgtctgcggtgcgctcaaatctgtttaac
actgtagtgtcgtatcgtttagccaaccatggcactaagcctcttgcgggtgattgtgtg
atgttggcgggcagcaaaagcttcttcgttacgcctgaatgggatctcatcgtattgaaa
cgtctgattgaaaaagacattcaactatcagcaccattatggggccgcggcatgatgctg
cctcaaggtgaagctgctgcggtggaaaccttggccatgagtgagttggctgatgattgc
tatggccttgaacatgcgggattagagcaagagcgtcgtccgttactgcttgaaccccaa
gcccttaaatacgaacaaaccgccgatggtctcgtgttggagtttgtattgcctgcgggc
agttttgccacatccttgttgagagagttagtcaattatcaagatgtcaaagagcagcaa
tggcaagcgacactggtgcaggagcctgcacccgagacaacggatgctaatgtagcggct
gatacaattgaaattaagactgaagctgcgcctaacattgaagcagagtcatga
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