Shewanella baltica OS185: Shew185_3149
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Entry
Shew185_3149 CDS
T00571
Name
(GenBank) transcriptional regulator, LysR family
KO
K18927
LysR family transcriptional regulator, L-lactate utilization regulator
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbm03000
]
Shew185_3149
Transcription factors [BR:
sbm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Shew185_3149
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_8
HTH_20
HTH_30
HTH_IclR
HTH_34
Motif
Other DBs
NCBI-ProteinID:
ABS09280
LinkDB
All DBs
Position
complement(3758621..3759520)
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AA seq
299 aa
AA seq
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MSDDLGAELQLVYLFVHLVNAGSFSQAAKELDMPIATVSRKLAKLEEKLDKQLFMRSTRK
LRLTEEGLALFQRYQSVVAQFDELSGAGSDKPEGTLRIAAPISIISIVFIQALNEFGRLY
PDIRLHISQSNELVDLIDKGIDVAIVGGAQPDSSWVSSTLGELDYCLFATPEYLAQAPKL
EHPDALEAHQLIKVWPLFNWHLKHPSGESFYFNGPTKLTLTDLHGAIQATLGHGGILYGP
ELFVKQQIKEGKLKVLLPEWIGEQRRISILYHQRSQQPLKVRVFIEFMQSKAPELFSMR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgatttaggcgctgaactacaacttgtctatctttttgtgcatttagtcaat
gcgggcagtttttcgcaggcggcgaaggagcttgatatgcccattgccacagtgagccgc
aagttagcgaagttggaagagaagctcgataagcagctttttatgcgcagcacccgcaag
ttacgattgacggaggaagggttggcactctttcaacgctaccagagtgtggttgcccaa
tttgatgaactgagtggtgcgggcagcgataaacccgagggaaccctacgcatcgccgcg
ccgatttcgattatttccatcgtgtttattcaagcattgaatgaatttggccgcctgtat
cccgatatccgtttgcacatttcccagagcaatgagttagtggatttgatcgacaagggc
atagatgtggcgattgtcggcggggctcagcctgattcttcttgggtgtcgagtacttta
ggcgagctggattattgcctgtttgccacgccagaatatttggctcaggcacctaaactt
gagcatcccgatgctctcgaagcccatcaactgataaaagtctggccgctgtttaattgg
catttaaagcatccgagcggtgagtctttttattttaatggcccaactaagctgaccctc
acggatttgcacggtgcgattcaggcgaccttaggccatggcgggatcttgtatggtccc
gaactatttgtaaaacagcagattaaagaagggaaacttaaagtattattgccagaatgg
attggcgagcagaggcggatttcgattttatatcatcagcgcagccagcagccgctaaag
gtaagagtctttattgagtttatgcagtcaaaggcgccagagttattctctatgcgttga
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